Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05465 ATGAAGTCGGATACATGGAAACCAGCCTTGCTAATGGTGGCGGTTCAGATCACATTTTCTGCTTGCAATGTGATCTACAAACTTGCCATAAATGATGGAATGAGCACCATTGTCATTGCAGCTTACCGTATGGCTTTTGCAGCGCTTACCACTATTCCTCTTGCTCTTATTTTTGAGAGGAACAAGAGACCGAAGATGACTTGGAGAGTGTTTTTGTTGTCAAATCTGAGTGGACTATTTGCGTATGTGTTACAAAAATTCAACCTTTTTCCTACAACTGTAATTGATGGGACTTTATTTCAAAACCTGTTCTATGGGGCCCTGGTTTTGACATCAGCAACGCTTGTGTCCGCAATCTACAACCTTATTCCCACTATGACCTTTATCTTAGCTGTTTCCTTCGGTTTGGAAAAATTAAATTGGAGAGCAGCATCAGGAAAGGCCAAGGTGATAGGAACTTTACTTGGACTTGCCGGGGCATTGCTTCTTACATTTTACAAAGGAATAGAATTTGATATTTGGCCTTTTTATGTCAACCTTTTGGACCAAAATGGGCAACTGCCAGATACTACTAATGATTTGTTGGGTGTTGTATGCGTCGTAATAAGCTGCCTCTGTTTCTCTTTGTGGCTCATCATTCAGGCTAAGATCAGTGAAGTATACCCATGCCCTCAGTCAAGCATAGCTTTGATGTCTACACTTGGAACAATACAATGCGTTATTGTAGGGTTTATTGTTGACAGCGATTTGAACCAATGGAGACTTGATTGGGATATTAGGCTCATCACCGTGCTTTTTTCGGGAATTGTGGCCTCCGGATTAATGATCCTTGTCATTGGATGGGTGGTACAGACGAAAGGGCCTTTATATGCTTCAGCTTTCAACCCTCTAATGCTTTTGATTGTGGCTGTCGTCGCTTCTATGCTGTTGGATGAGAAGTTAAATTTAGGAAGTGTGCTAGGAGGAGTGCTGATTGTGTGTGGCCTATACACTGTGCTATGGGGTAAGAGCAGAGAAGCGCAGAAGAATGCTCATGAATTAGAGCCACCAGAAATATTTGGAGATTCAGAAGTAACGAGGTCGTTGTTAAATCCATGA 1098 0.4199 MKSDTWKPALLMVAVQITFSACNVIYKLAINDGMSTIVIAAYRMAFAALTTIPLALIFERNKRPKMTWRVFLLSNLSGLFAYVLQKFNLFPTTVIDGTLFQNLFYGALVLTSATLVSAIYNLIPTMTFILAVSFGLEKLNWRAASGKAKVIGTLLGLAGALLLTFYKGIEFDIWPFYVNLLDQNGQLPDTTNDLLGVVCVVISCLCFSLWLIIQAKISEVYPCPQSSIALMSTLGTIQCVIVGFIVDSDLNQWRLDWDIRLITVLFSGIVASGLMILVIGWVVQTKGPLYASAFNPLMLLIVAVVASMLLDEKLNLGSVLGGVLIVCGLYTVLWGKSREAQKNAHELEPPEIFGDSEVTRSLLNP. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05465 365 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Seca11g05465 365 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020
Seca11g05465 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 338 - -
Seca11g05465 365 PANTHER WAT1-RELATED PROTEIN 7 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05465 Seca-Chr11 152690020 152694845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05465 7 342 Nodulin-like Gene Family AT1G25270 39.706 3.60e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05465 - - mtr:25493309 528.48