Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05462 ATGAAGTCAGATACATGGAAACCAACCTTGCTAATGGTGGCAGTTCAGATCACATTTTCTGCTTGCAATGTTTTCTACAAACTTGCCATAAATGATGGAATGAGCACCATTGTCATTGCAGCTTACCGTCTGGCCTTCGCATCGCTTACCACTATTCCTCTTGCTCTTATTTTTGAGAGGAACAAGAGACCGAAGATGACTTGGAGGGTGTTTTTGTTGTCAAATCTGAGTGGATTATTTGCAACTTTATTTCAAAACCTGTTCTATGGGGCCCTGGTTTTTACATCAGCAACGCTTGTGTCCACAATCTACAACCTTATTCCCACTATGACCTTTATCTTAGCTGTTTCCTTCGGGCAACTTCCAGATACTACTAATGATTTGTTGGGTGTTGTATGCGTCGTAATAAGCTGCTTCCTTTTCTCTTTATGGCTCATCATTCAGGCTAAGATCAGTGAAGTATACCCATGCCCTCAGTCAAGCATAGCTTTGATGTCTACAATTGCAACAGTACAATGTTTTATTTTAGGGTTTATTGTTGACAGCGATTTGAACCAATGGAGACTTGATTGGAATATTAGGCTCATCACTGTGCTTTTTTCGACGAAAGGGCCTTTATTTGCTTCGGCTTTCAACCCTCTAATGCTTTTGATTGTGGCTGTCGTCACTTCTATGCTGTTGGATGAGAAGTTAAATTTAGGAAGTGTGCTAGGAGGATTGTTCATTGTGTGTGGCCTATACACGGTGCTATGGGGTAAGAGCAGAGAAGCGCAGAAGAATGCTCATGAATTAGAGCCACCAGAAATATTTGGCGATTCAGAAGCAACAAGGTCGTTGTTAAATCCATGA 849 0.4134 MKSDTWKPTLLMVAVQITFSACNVFYKLAINDGMSTIVIAAYRLAFASLTTIPLALIFERNKRPKMTWRVFLLSNLSGLFATLFQNLFYGALVFTSATLVSTIYNLIPTMTFILAVSFGQLPDTTNDLLGVVCVVISCFLFSLWLIIQAKISEVYPCPQSSIALMSTIATVQCFILGFIVDSDLNQWRLDWNIRLITVLFSTKGPLFASAFNPLMLLIVAVVTSMLLDEKLNLGSVLGGLFIVCGLYTVLWGKSREAQKNAHELEPPEIFGDSEATRSLLNP. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05462 282 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Seca11g05462 282 PANTHER WAT1-RELATED PROTEIN 8 116 IPR030184 GO:0016020|GO:0022857
Seca11g05462 282 Pfam EamA-like transporter family 8 142 IPR000620 GO:0016020
Seca11g05462 282 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 255 - -
Seca11g05462 282 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05462 Seca-Chr11 152627113 152630792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05462 7 258 Nodulin-like Gene Family AT1G25270 32.198 2.82e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05462 - - mtr:25493309 374.015