Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05461 ATGAAGAACAAGTGGGATACGTGTATACCAGCCTTGCTAATGGTGACAGTGCAGATTGTATATTCTGGCTGCAATGTGATCTACAAGCTTGCCGCAAATGATGGAATGAGTACTATTGTCATTGCAGCATACCGCTTGGCCTTCGCAGCTATTACCACTATTCCTCTTGCTCTTATTTTTGAAAGGGAGAGACCAAAGATGACTTGGAGGGTATTTTTCATGGCATCTCTAAGTGGACTATTGGTTGGAACTTTATTTCAAAACCTGTTCTTCGGGGCCCTGGTTCTGACATCAGCAACCCTTGTGTCCGCCATCTACAACCTTATTCCCACCATCACCTTTATCTTAGCTGTATCTTTCGGCTTTGAAAAATTAAATTGGGGAGCAGCATCAGGAAAGGCCAAGGTGATAGGTACTTTACTTGGACTTATTGGGGCAATGCTGCTGACATTTTACAAAGGAGAAGAATTTGATATTTGGCCCTTTTATATCAACCTTTTGGATCCACAGCAAAACCAAAATGGACACGTGGCTGATACAAGTAGTGAATTATTGGGTGTTCTATTTGTTGTAATAGGCTGCTTCTGTTTCTCTTTGTGGCTCATCCTTCAGGCTAAAATGATGGAAGAATACCCATGTCCTATATCAAGCGTAGCTATGCTATCTACAATAGCAACAACACAATGCGTTATTTTTGGTTTTATTGTTGAGAGGGATTTGAACGATTGGAAATTGGGTTGGAATATCAGGCTCCTAACCGTCCTTTTTGCGGGAATTTTGGGCTCCGGATTAATGATTCTTGCCACTGGATGGGTTGTACAGAAGAAAGGGCCTTTATTTACGTCGGCTTTCAACCCGCTGATGCTTTTGATTGTGGCCGTTGTTGCTTCTATGCTGTTGGATGAGAAATTAAATTTAGGAAGTGTGCTAGGAGGAGTGCTGATTGTGTGTGGCCTGTACTCGGTGCTATGGGGTAAGAACAAAGAAATGCAAAATAAGACTCTGAGAGAGACACTAGAAATCAGTGGAGATTCCGAAGCTACGAGGCTATTGTTAAATCCATGA 1065 0.4216 MKNKWDTCIPALLMVTVQIVYSGCNVIYKLAANDGMSTIVIAAYRLAFAAITTIPLALIFERERPKMTWRVFFMASLSGLLVGTLFQNLFFGALVLTSATLVSAIYNLIPTITFILAVSFGFEKLNWGAASGKAKVIGTLLGLIGAMLLTFYKGEEFDIWPFYINLLDPQQNQNGHVADTSSELLGVLFVVIGCFCFSLWLILQAKMMEEYPCPISSVAMLSTIATTQCVIFGFIVERDLNDWKLGWNIRLLTVLFAGILGSGLMILATGWVVQKKGPLFTSAFNPLMLLIVAVVASMLLDEKLNLGSVLGGVLIVCGLYSVLWGKNKEMQNKTLRETLEISGDSEATRLLLNP. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05461 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Seca11g05461 354 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Seca11g05461 354 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Seca11g05461 354 PANTHER WAT1-RELATED PROTEIN 10 333 IPR030184 GO:0016020|GO:0022857
Seca11g05461 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05461 Seca-Chr11 152526060 152539605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05461 14 344 Nodulin-like Gene Family AT1G68170 41.369 3.74e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05461 - - mtr:25493309 527.709