Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05458 ATGAGAGATTCACGGAACCTATTGCAAGGGTTGAAGCCTGTGTTGCTTATGGTTTTGGTGCAGATTTTTTTGACAGTGGCAAATTTGCTGAACAAGATGGCAATAAGTGATGGAATGCACGTTCCTGTAATCACTGCCTACCGATTCATTTTTGGAACTGTTTGCACTCTTCCTCTTGCTCTTCTTCTTGAAAGAAAGAGTAGACCACTGTTGACATGGAGGGTGCTGTTCATGTCATTTCTTTGCGGCCTCTTTGGTGGGGCTTTATTCCAAAACCTTTACTTCAGTGCTTTGGCTTTGATATCAGCAACATTTGCTGTCGCCATTTATAATCTCGTTCCAACGATCACTTTCATCCTTGCTATCTTGTGCGGCTTGGAAAAATTAAAAATAAAAACGGCAGCAGGAATGGTAGTTGGACTTGGCGGGGTGTTGGGAACAGTAGTTGGACTTGGCGGGTCAATGCTTCTTACCTTTTTCAAAGGGGCACAAATTAACATTTGGACCTTCCATATTAATCTTTTGCATCACAATCAACATGGCCACGTAGGAACACCGAATCATGACCATACAAGAATATTGCTTGGTGTTTTATGTGGCTTTGGAAGTTGCTTCAGTTTTTCAATATGGCTCATTATTCAGGCAAAGATGAGTAAAAAATATCCAAGTGATTACTCAGGCACAACATTGATGATCTTAATGGGAGCAATACAATCCACTGCCTTTGCCCTTTGTTTTGAGAAGGATTGGAGTCAATGGAAGTTGGGTTGGAATATTAGGACTCTTAATGCAGCTTATTCGGGAATTGTGGGCTTATTAATTATTGCCATTGCGTGGTGTGTGAGGATGAGAGGTCCAGTGTTTGCATCTGCTTTCAACCCTCTTTGCCTTGTTCTTGTGGCTGTTCCTGCTTCCATGTTTTTAGATGAGAACCTATACGTAGGAAGTGTGATTGGAGGAGCGTTAATTGTATGTGGCTTGTACTTGGTGCTATGGGGTAAGAGCAAAGAAACTAAAAAGGTGACACCCTTGGTGTCATCAGAATTAGAGGAAGCGACTAACGTTGTTGTCATGTCTACAGCAATAGATCATGACAATAGTGACTACAACAACAATAGATATAGATGTAACGACTAA 1137 0.4134 MRDSRNLLQGLKPVLLMVLVQIFLTVANLLNKMAISDGMHVPVITAYRFIFGTVCTLPLALLLERKSRPLLTWRVLFMSFLCGLFGGALFQNLYFSALALISATFAVAIYNLVPTITFILAILCGLEKLKIKTAAGMVVGLGGVLGTVVGLGGSMLLTFFKGAQINIWTFHINLLHHNQHGHVGTPNHDHTRILLGVLCGFGSCFSFSIWLIIQAKMSKKYPSDYSGTTLMILMGAIQSTAFALCFEKDWSQWKLGWNIRTLNAAYSGIVGLLIIAIAWCVRMRGPVFASAFNPLCLVLVAVPASMFLDENLYVGSVIGGALIVCGLYLVLWGKSKETKKVTPLVSSELEEATNVVVMSTAIDHDNSDYNNNRYRCND. 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05458 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 148 - -
Seca11g05458 378 PANTHER WAT1-RELATED PROTEIN 12 343 IPR030184 GO:0016020|GO:0022857
Seca11g05458 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 336 - -
Seca11g05458 378 Pfam EamA-like transporter family 12 148 IPR000620 GO:0016020
Seca11g05458 378 Pfam EamA-like transporter family 195 331 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05458 Seca-Chr11 152445166 152447517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05458 11 373 Nodulin-like Gene Family AT1G25270 37.808 4.55e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05458 - - gmx:100809587 454.136