Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05452 ATGGTGTTTGTGCAGGTTGCGTATGCTACTGGGAATTTGATCTACAAGCTCGCCATCAACGATGGAATGAGCATTAGCGTTATCACTGCCTACCGCTTAATTTTCGGACTTGTTTCCTCTCTTTTTCTCGCTCTTATTTTTGAAAGGAGCAGACCACCGCTGACGTGGAGGGTGCTGTTGATGTCAATTCTTTGCGGCCTGTTTGGGTACGGTTCATGTAATTATTTTCTTTTTCAGTATAATTTAAACAGAGGGAGTTTATTCCAAAACCTTTTTGTCAATGCTTTGGATTTGATATCAGCGACATTTGCTACCGCCATTTTTAATCTAGTTCCTGCTCTCACCTTTATCCTCGCCGTCTTGTGCCGCTTGGAAAAATTAAATATGAAAACAGCAGCAGGGATGGTGAAGGTGGTGGGAACTGTAGTTGGAATTGGCGGGTCAATGGTGCTGACATTTTTCAAAGGGGCACAAATTAACTTATGGCCCTTCCATGTTAATCTTATGCATCAAAATGGCCACATAGGAACACAGAATGCTGACAACACAAGAAAAATTCTTGGTGTTTTATGTGGTCTTGGAAGTTGCTTGAGTTTTTCATTATGGCTCATCATTCAGGCTAAGATGAGTAAGGAATATCCAAAATACTCAAGCACAACATTGATGACCTTAATGGGGGCAATACAAGCCACTGCCTATGCCCTTTGTGTTGAGAAAGATTGGAGTCAATGGAGGTTGGGATGGAGTATTAGGCTTCTTGCTTCGGTTTATTCGGGGATTGTGGTCTCTGGAATAGTGATTATCATCACTGCATGGTGTGTACAAATGAGAGGTCCATTGTTTGCATCTATTTTCAACCCTCTTTGCCTTGTGGTGGTGGCTGTTGCTGGTTCCATGTTGTTAGATGAGAAACTATATGTAGGAAGTGTGATTGGAGGAGTGATAATTGTGTGTGGCTTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAACCAAAAAGATGAATTTGGTGTCACCAGAAAATACCCAAGAATTTGAAGGGACTGAGGTTGTTAATGTCAGGTCTACGTCTGAAGATCATGACAATGGTGACTGCAGCAACAATAGTAAGAGCAATAATATTATTGTTACAAAGGTTAATGATGATGAATCTCCGAAAAGTGGAGATCAATCGAATGGCATTGACAAAGCCAAGGTGGAGACTGAAGAAAAAGGAGGAAGCTAA 1224 0.415 MVFVQVAYATGNLIYKLAINDGMSISVITAYRLIFGLVSSLFLALIFERSRPPLTWRVLLMSILCGLFGYGSCNYFLFQYNLNRGSLFQNLFVNALDLISATFATAIFNLVPALTFILAVLCRLEKLNMKTAAGMVKVVGTVVGIGGSMVLTFFKGAQINLWPFHVNLMHQNGHIGTQNADNTRKILGVLCGLGSCLSFSLWLIIQAKMSKEYPKYSSTTLMTLMGAIQATAYALCVEKDWSQWRLGWSIRLLASVYSGIVVSGIVIIITAWCVQMRGPLFASIFNPLCLVVVAVAGSMLLDEKLYVGSVIGGVIIVCGLYMVLWGKSKETKKMNLVSPENTQEFEGTEVVNVRSTSEDHDNGDCSNNSKSNNIIVTKVNDDESPKSGDQSNGIDKAKVETEEKGGS. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05452 407 MobiDBLite consensus disorder prediction 382 407 - -
Seca11g05452 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 329 - -
Seca11g05452 407 MobiDBLite consensus disorder prediction 354 407 - -
Seca11g05452 407 PANTHER WAT1-RELATED PROTEIN 1 338 IPR030184 GO:0016020|GO:0022857
Seca11g05452 407 MobiDBLite consensus disorder prediction 366 381 - -
Seca11g05452 407 Pfam EamA-like transporter family 87 145 IPR000620 GO:0016020
Seca11g05452 407 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05452 Seca-Chr11 152415658 152418057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05452 1 341 Nodulin-like Gene Family AT1G68170 43.440 4.55e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05452 - - lja:Lj4g3v0336250.1 457.988