Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05438 ATGGCCTCCCTTGAAGCTAGAACTAATGGAATTTCCATTAACCATGTTGAGATCCCTATCCATGCCAATGGTGTGGAGCCAAAACCAAGCCAAGGGGTTGAGGAGATTGACTACTCCCAAAGGGGTCAGTGGCTTAGAGCTGCTGTATTGGGAGCCAATGATGGGTTAGTCTCAGTTGCATCATTAATGATGGGTGTTGGAGCTGTGAAGGAAGACATAAGTGCCATGCTTCTAGCTGGTTTTGCTGGCTTAGTAGCTGGTGCTTGTAGTATGGCAATTGGAGAGTTTGTCTCTGTCTACACTCAATATGACATTGAGATGGCTCAGATTAAAAGACAGAGTGAAACTAATAATAATGATGAAGAAGCTCAAAGGGAGAAGCTTCCAAACCCATTTCAGGCTGCACTTGCATCAGCAGTGGCATTTTCTGTGGGTGCTTTGGTGCCACTGCTAGCTGCTGTGTTTATAAGGAATCACAAGATAAGGATGGGTGTTGTTGCTGCTGTGGCTAGTTTGGCTTTGTTGGTATTTGGAGGGGTTGGTGCAGTGCTTGGAAAAACTCCAGTGAGGAGGTCTTGTGTTAGAGTACTCATTGGAGGTTGGATGGCTATGGCCATAACATTTGGACTCACCAAATTGATTGGCTCCTCTGGAATTTAA 660 0.453 MASLEARTNGISINHVEIPIHANGVEPKPSQGVEEIDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKEDISAMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEMAQIKRQSETNNNDEEAQREKLPNPFQAALASAVAFSVGALVPLLAAVFIRNHKIRMGVVAAVASLALLVFGGVGAVLGKTPVRRSCVRVLIGGWMAMAITFGLTKLIGSSGI. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05438 219 CDD Nodulin-21 43 188 - -
Seca11g05438 219 Pfam VIT family 45 126 IPR008217 GO:0005384|GO:0030026
Seca11g05438 219 Pfam VIT family 125 211 IPR008217 GO:0005384|GO:0030026
Seca11g05438 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 35 214 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05438 Seca-Chr11 152289271 152289930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05438 36 219 Nodulin-like Gene Family AT3G43660 69.022 2.21e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05438 K22736 - gmx:100802489 335.495