Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05433 ATGGCCTCCCTTGAAGCTAGAACTAATGGAATTTCCAATAGTTATATTGAGATCCCTATCCATGCCAATGGTGTGGAGCCAAAACCAAGCCAAGGGGTTGAAGAGATTGATTACACTCAAAGGGGTCAATGGCTTAGAGCAGCAGTGTTGGGAGCCAATGATGGGTTAGTCTCAGTTGCATCACTGATGATGGGTGTTGGAGCTGTGAAAGATGACATAAGTTCCATGCTTCTAGCTGGTTTTGCTGGCTTAGTAGCTGGTGCTTGTAGTATGGCAATTGGAGAGTTTGTCTCTGTCTACACTCAGTATGACATTGAGATGGCTCAGATTAATAGAGAGAGTAGTGAAACTAATAATAATGATGATGAAGAAGCTCAAAAGGAGAAGCTTCCAAACCCATTTCAGGCTGCACTTGTATCAGCACTTGCATTTTCTGTGGGTGCTTTGGTGCCACTGCTAGCTGCTGTGTTTATAAGGAATCACAAGATAAGGATGGGTGTTGTTGCTGCTGTGGCTAGTTTGGCTTTGTTGGTATTTGGAGGGGTTGGTGCAGTGATTGGAAAAACTCCAGTGAGGAGATCTTGTGTTAGAGTGCTGATTGGAGGTTGGATGGCTATGGCCATAACATTTGGTCTCAGCAAATTGATGGGCTCCTTTGGAATTTAA 666 0.4399 MASLEARTNGISNSYIEIPIHANGVEPKPSQGVEEIDYTQRGQWLRAAVLGANDGLVSVASLMMGVGAVKDDISSMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEMAQINRESSETNNNDDEEAQKEKLPNPFQAALVSALAFSVGALVPLLAAVFIRNHKIRMGVVAAVASLALLVFGGVGAVIGKTPVRRSCVRVLIGGWMAMAITFGLSKLMGSFGI. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05433 221 CDD Nodulin-21 43 190 - -
Seca11g05433 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 35 216 IPR008217 GO:0005384|GO:0030026
Seca11g05433 221 Pfam VIT family 45 127 IPR008217 GO:0005384|GO:0030026
Seca11g05433 221 Pfam VIT family 127 212 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05433 Seca-Chr11 152241841 152242506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05433 36 221 Nodulin-like Gene Family AT3G43660 67.204 6.96e-89 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05433 K22736 - gmx:100802489 323.553