Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05432 ATGGCCTCCCTTGAAGCTAGAACTAATGGAAATTCCAATAACCATATTGAGATCCCTATCCATGCCAATGGTGTGGAGCCAAAACCAAGCCAAGGGGTTGAAGAGATTGATTATTCTCAAAGGGGTCAGTGGCTTAGAGCTGCTGTGTTGGGAGCCAATGATGGGTTAGTCTCAGTTGCGTCATTGATGATGGGTGTTGGAGCAGTGAAGGAAGATATAAGTGCCATGCTTCTTGCTGGTTTTGCTGGCTTAGTAGCTGGTGCTTGTAGTATGGCAATTGGAGAGTTTGTCTCTGTCTACACTCAGTATGACATTGAGATGGCTCAGATTAAAAGAGAAAGTGAAACTAATAATAATAATGATGATGAAGAAGCTCAAAGGGAGAAGCTTCCAAACCCATTCCAGGCTGCAATTGCATCAGCACTTGCATTTTCTGTGGGTGCTTTGGTGCCACTGCTAGCTGCTGTGTTTATAAGGAATCACAAGATAAGGATGGGTGTTGTTGCTGCTGTGGCTAGTTTGGCTTTGTTGGTGTTTGGAGGGGTTGGTGCAGTGATTGGAAAAACTCCGGTGAGGAGATCTTGTGTTAGAGTGCTGATTGGAGGTTGGATGGCTATGGCCATAACATTTGGCCTCACCAAATTGATTGGCTCCTCTGGAATTTAA 666 0.4474 MASLEARTNGNSNNHIEIPIHANGVEPKPSQGVEEIDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKEDISAMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEMAQIKRESETNNNNDDEEAQREKLPNPFQAAIASALAFSVGALVPLLAAVFIRNHKIRMGVVAAVASLALLVFGGVGAVIGKTPVRRSCVRVLIGGWMAMAITFGLTKLIGSSGI. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05432 221 CDD Nodulin-21 43 190 - -
Seca11g05432 221 Pfam VIT family 45 126 IPR008217 GO:0005384|GO:0030026
Seca11g05432 221 Pfam VIT family 127 213 IPR008217 GO:0005384|GO:0030026
Seca11g05432 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05432 Seca-Chr11 152162935 152163600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05432 36 221 Nodulin-like Gene Family AT3G43660 69.355 2.03e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05432 K22736 - gmx:100802489 337.421