Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05410 ATGAGAACTCCCTTGGATTTTTCTCCCACTTCACAGATAAAGTCACACACAACACAAGTGTGTATTTCCAAAGAAAAAACTTCAAAACTAGCCTCAGTTTCCTCCATAGTAGGCTTTAGCAAAGGTAAAAGAGAGATGGCAACTGCAACATCTGGAGCTGTGTTAAATGGGTTGGGATCTTACTTCTTATGTGGAGGAAAGAGGAGTCAAACCCTGCTAGCTGCTGCTATTGGAGGCAAAGTTAATGTTGGTGCTGTTAGTCCTAAAAGTGTCATTGTAGCAGTTGCTGCTGCACCAAAGAAGTCATGGATCCCTGCTGTAAAAGGTGGTGGAAATTTCATTGACCCTGAATGGCTTGATGGCTCGCTACCAGGTGACTTTGGTTTTGATCCATTAGGCCTAGGAAAGGACCCAGCATTCCTCAAATGGTATAGAGAAGCTGAGTTAATTCATGGAAGGTGGGCAATGGCTGCAGTTGTAGGCATCTTTGTTGGCCAGGCATGGAGTGGAGTTCCATGGTTTGAAGCAGGAGCTGATCCTAATGCACTTGCTCCTTTCTCTTTTGGTTCCCTTCTGGGCACCCAGTTGCTTCTCATGGGATGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCAGATTCACAATCAGTGGAATGGGCCACACCATGGTCAAGAACTGCTGACAACTTTGCCAATTCTACTGGTGATCAAGGCTACCCTGGGGGCAAATTCTTTGACCCATTGGGATTTGCTGGCACAATCAAGGATGGAGTTTACATTCCAGATACAGAGAAGCTAGAAAGACTGAAATTGGCTGAGATTAAGCATGCTAGGATTGCAATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGACAAGGAAAGACACCTCTTGGTGCTCTTGGCTTGTAA 915 0.4546 MRTPLDFSPTSQIKSHTTQVCISKEKTSKLASVSSIVGFSKGKREMATATSGAVLNGLGSYFLCGGKRSQTLLAAAIGGKVNVGAVSPKSVIVAVAAAPKKSWIPAVKGGGNFIDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNALAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTADNFANSTGDQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05410 304 Gene3D Chlorophyll a/b binding protein domain 116 302 - -
Seca11g05410 304 SUPERFAMILY Chlorophyll a-b binding protein 113 304 - -
Seca11g05410 304 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 97 302 IPR001344 GO:0009765|GO:0016020
Seca11g05410 304 FunFam Chlorophyll a-b binding protein, chloroplastic 116 303 - -
Seca11g05410 304 Pfam Chlorophyll A-B binding protein 116 292 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05410 Seca-Chr11 151807187 151808572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05410 46 304 Chloroplast and Mitochondria Gene Families AT1G15820 83.462 7.35e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05410 K08917 - gmx:100783223 494.197