Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05368 ATGAGTAAAGGATATCCAAGCCAATACTCAAGCACAACATTGATGTCCTTAATGGGGGCAATACAAGCCACTGTATTTGCCCTTTGTGTTGAGAAAGATTGGAGGCAATGGAGGTTTGGGTGGAGTATTAGGCTTCTTGCTGCGGTTTATTTGGTATGGAAGTGTGGTCTCTGGATTAGTGATTATCATCACTGCATGGTGTGTACAATTGATAGGTCCATTGTTTGCATCTATTTTCAACCCTCTCACCTTGTGGTGGTGGCTATTGCTGGTTCCTTGTTGTTAGATGAGAAACTAACTGTAGAAAGTGTGATTAGAGGAGTCATAATTGTTTGTTGCTTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAATGAAAAAGATGAATATGGAGCCACTAGACAATACCCAAGAATTTGAAGCGACTGAGGTGGTTAATGTCAGGTCTACGTCTGTAGATAATGAGAATAGTGGTTGTAGCAACAATATTACTAGTGAGAGGAATATTACGGGAGACGTCTTAGATACACAACTTGATAATTGA 543 0.4052 MSKGYPSQYSSTTLMSLMGAIQATVFALCVEKDWRQWRFGWSIRLLAAVYLVWKCGLWISDYHHCMVCTIDRSIVCIYFQPSHLVVVAIAGSLLLDEKLTVESVIRGVIIVCCLYMVLWGKSKEMKKMNMEPLDNTQEFEATEVVNVRSTSVDNENSGCSNNITSERNITGDVLDTQLDN. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05368 180 PANTHER WAT1-RELATED PROTEIN 2 131 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05368 Seca-Chr11 151110701 151111454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05368 1 128 Nodulin-like Gene Family AT1G68170 42.636 2.17e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05368 - - lja:Lj4g3v0336250.1 153.68