Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05367 ATGTATTGGGATTCCATTAATTTGTGGTTAATTAAAGACTGCGCGGAACAGGCTAAGATGAGTAAAGAATATCCAAGCCAATACTCAAGCACAACATTGATGTCCTTAATGGGGTCAATACAAGACACTGCCTTTGCCCTTTGTGTTGAGAAGGATTGGAGGCCATTGAGGTTGGGGTGGAGTATTAGGCTTCTTGCTGCGGTTTATTTGGGAAGTGTGGTCTCTGGATTAGTGATTCTCATCACTGCATGGTGTGTACAATTGATAGGTCCATTGTTTGAGTCTATTTTCAACCCTCTCTACCTTGTGGTGGTGGCTATTGCTGGTTCCTTGTTGTTAAATGAGAAACTAACTGTAGAAAGTGTGATTGAAGGAGTCATAATTGTTTGTGGCTTTTACATGGTGCTGTGGGGTAAGAGAAAAGAAATGAAAAAGATAAATATGGAGCCACTAGACAATACCCAAGAATTCGAAGCGACTGAGGTGGTTAATGTCAGGTCTACGTCTGTAGATAATGAGAATAGTGACTGTAGCAACAATATTACTAGTGAGAGGAATATTACGGGAGAAGTCTTAGATACACAACTTGATAACTGA 597 0.4037 MYWDSINLWLIKDCAEQAKMSKEYPSQYSSTTLMSLMGSIQDTAFALCVEKDWRPLRLGWSIRLLAAVYLGSVVSGLVILITAWCVQLIGPLFESIFNPLYLVVVAIAGSLLLNEKLTVESVIEGVIIVCGFYMVLWGKRKEMKKINMEPLDNTQEFEATEVVNVRSTSVDNENSDCSNNITSERNITGEVLDTQLDN. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05367 198 PANTHER WAT1-RELATED PROTEIN 9 152 IPR030184 GO:0016020|GO:0022857
Seca11g05367 198 Pfam EamA-like transporter family 19 136 IPR000620 GO:0016020
Seca11g05367 198 SUPERFAMILY Multidrug resistance efflux transporter EmrE 58 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05367 Seca-Chr11 151108679 151109490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05367 5 182 Nodulin-like Gene Family AT1G68170 41.011 1.26e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05367 - - lja:Lj6g3v2244450.1 201.445