Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05366 ATGAAAACCTTAGCAGGGATGGTAAAGGTGTTGGGAACTGTAGTTGGAATTGGCGGTTCAATGGTGCTGACATTTTTCAAAGGGACACAAATCAACATATGGACCTTCCACGTTAATCTTATGCATCAAAATCAAAATGGCCACATAGGAACACGAAATGCTGACAATACAAGAAAAACTCTGGGAAAAACTCTTTGTGTTTTATGTGGTCTTGGAAGTTGCTTGAGTTTTTCATTATGGCTCATCATTCAGGCTAAGATGAGTAAAGAATATTTAAGCCAATACTCAAGCACAACATTGATGTCTTTAATAGGGGCAATACAAGCCACTATCTTTGCCCTTTGTGTTAAGAAAGATTGGAGGCAATGGAGGTTGGGGTGGAGTATTAGGCTTCTTGTTGCGGTTTATTTGGGAAGTGTGGTCTCTAGATTAGTGATTATCATCACTGCATGGTGTGTACAATTGAGAGGTCCATTGTTTGCATCTATTTTCAACCCTCACTGCCTTGTGCTGGTGGCTATTGTCGGTTCCTTGTTGTTAGATAAGAACGTGCATGTTTCTAGTGTGATTGGAGGAGTCATAATTGTTTGTGACTTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAATGAAAAAGATGAATACTGAGCCACTAGAAAATACCCAAGATTTTGAAGCGACTGAGGTTGTTAATGTCAGATCTACGTTTGTAGATAATGAGAATAGTGACTGCAACAACAATATTACTAGTGAGAGGAATATTACGGGAGACGTCTTAGATACACAACTTGATAATTGA 798 0.3922 MKTLAGMVKVLGTVVGIGGSMVLTFFKGTQINIWTFHVNLMHQNQNGHIGTRNADNTRKTLGKTLCVLCGLGSCLSFSLWLIIQAKMSKEYLSQYSSTTLMSLIGAIQATIFALCVKKDWRQWRLGWSIRLLVAVYLGSVVSRLVIIITAWCVQLRGPLFASIFNPHCLVLVAIVGSLLLDKNVHVSSVIGGVIIVCDLYMVLWGKSKEMKKMNTEPLENTQDFEATEVVNVRSTFVDNENSDCNNNITSERNITGDVLDTQLDN. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05366 265 PANTHER WAT1-RELATED PROTEIN 1 215 IPR030184 GO:0016020|GO:0022857
Seca11g05366 265 Pfam EamA-like transporter family 66 203 IPR000620 GO:0016020
Seca11g05366 265 SUPERFAMILY Multidrug resistance efflux transporter EmrE 107 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05366 Seca-Chr11 151097913 151107236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05366 6 223 Nodulin-like Gene Family AT1G68170 43.578 8.10e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05366 - - lja:Lj4g3v0336250.1 305.834