Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05364 ATGAATTTCCTTCTTCATCCATCAGTTGATCAATGTAATGCCACTTACAATGATAGTCCTAATAGTGTTATGGATTCTAATCTAGAGTTTGTTACAACAATAATTGAGGAGGAAGCCATCATCAAGTCTAATAAAGAAAGGAAAAGAACTCAAAGAGAGGAAGCTGAGGGCATTTTCCTGACATGGGAAGATTTGCATGTGACTGTTCCAAATGGAAGGAAAGGCAGGAAAGCAATTCTTCATGGTCTGACTGGTTATGCCAAGCCAGGGCAGGTCTTGGCTGTAATGGGACCTTCTGGCTGTGGCAAGTCAACACTACTTGATGCTTTAGCAGGTAGATTAAGTTCAAGCACAAAGCAAACAGGGAAGATTCTAATCAATGGCCACAGACAATCACTGGCTTATGGAACATCTGCATATGTAACACATGATGATGCTATGTTGTCAACGTTAACAGTTGGAGAAGCAGTGTACTACTCAGCTCAACTCCAATTTCCAGACACAATGTCCAACAGAGACAAGAAACACAGAGCAGAGTTTACAATCAGACAAATGGGTCTACAAGATGCCACTAACACAAGGATAGGAGGGTGGGGTTGTAAAGGCCTTAGTGAGGGGCAAAAGAGGAGACTTGCCATTTGCATTGAGATTCTTACAAGTCCCAAACTTCTCCTTCTTGATGAACCAACTAGTGGACTGGACAGTGCAGCTTCCTATTATGTCATGAGTAGAATTGCCAGTGTAAAGATAAGAGATGGCATCAAAAGGACAATTGTTGTATCCATTCATCAGCCTAGTAGCGAAGTTTTTGAACTCTTCAATAATCTTTGCCTTCTGTCTTCAGGTGAAACAGTATATTTTGGCCCCTCTTGTGCTGCAATTGAGTTTTTTGCTTCAAATGGCTTCCCTTGTCCACCACTCCACAACCCTTCTGATCATTTCTTAAGGATCATAAACAAGGATTTCAAACTGGATGATGAAGAATGCTTCCATGTAGCAGTATCCAAAGAAGAAGCAGTTGATATCCTTATTAAGTTTTACAAATCTTGTGAAATTAGTAACGAAGTTCAGAAAGAAGTAACAGCAATAGGTGAAAGTGAATATGGTTTTGTGGAGAGGAACAGAACACAAGCTGCATTTCTTACTCAATGCCACATTCTTACAAGAAGATCTTCAGTGCACTTGTTTCGTGATGTAAGCAATTATTGGTTGCGTCTAGCTATCTTTATTGTAGCAGCTATTAGTCTGGGCACTATTTTCTTTCATGTTGGTTCAAGTGATGCATCTATTCAGGCTAGAGGGGCACTGGTCTCCTTTGTTGCTTCAGTCCTGACTTTCATAACCCTTCTTGGTGGATTCCCTCCATTTGTGGAACAAATGAAGGTATTTCAACGTGAGAGATTGAATGGGCATTATGGTGTTGCTGCTTTTGTCATTAGCCACACATTATCACCAATTCCATATGTGATACTAATGTCACTGATTCCTGGAGTGATTGCTTATTACCTTTCAGGACTTCACACAGGGTTTGAACGTTTGCTATACTTTTCTTGTGTGTTATTTGCCTGTATATTGTGGGTTGAAAGCCTCATGTTGGTTGTTGCAAGTATTTTTTCCAATCCTAATGTGGGCATCACAATCTGTGGCGGTGTTGTGGGAGTCATGATTTTAACTGGTGGATTCTTTCGCCTCCCAAATGATCTTCCCAGACCATTTTGGAAATATCCTATGTATTATGTTTCCTCCCATAAATATGCCTTCCAAGGATTGTTCAAGAATGAGTTTATTGGTTTAAAGTTGGCAAGAGATCAAGATGGAGGTAACTTAATTAGTGATAAAGAAATTCTGACCAAGATATGGCAAGTGGAAATGGGTCACTCAAAGTGGGTTGATCTTGCTATCTTGCTAGGAATAATTGTTTTGTATAGAATTATGTTCTTGGTAATCACTAAGGGCAAGGAGAAGATGAAGGCTTGA 1977 0.3996 MNFLLHPSVDQCNATYNDSPNSVMDSNLEFVTTIIEEEAIIKSNKERKRTQREEAEGIFLTWEDLHVTVPNGRKGRKAILHGLTGYAKPGQVLAVMGPSGCGKSTLLDALAGRLSSSTKQTGKILINGHRQSLAYGTSAYVTHDDAMLSTLTVGEAVYYSAQLQFPDTMSNRDKKHRAEFTIRQMGLQDATNTRIGGWGCKGLSEGQKRRLAICIEILTSPKLLLLDEPTSGLDSAASYYVMSRIASVKIRDGIKRTIVVSIHQPSSEVFELFNNLCLLSSGETVYFGPSCAAIEFFASNGFPCPPLHNPSDHFLRIINKDFKLDDEECFHVAVSKEEAVDILIKFYKSCEISNEVQKEVTAIGESEYGFVERNRTQAAFLTQCHILTRRSSVHLFRDVSNYWLRLAIFIVAAISLGTIFFHVGSSDASIQARGALVSFVASVLTFITLLGGFPPFVEQMKVFQRERLNGHYGVAAFVISHTLSPIPYVILMSLIPGVIAYYLSGLHTGFERLLYFSCVLFACILWVESLMLVVASIFSNPNVGITICGGVVGVMILTGGFFRLPNDLPRPFWKYPMYYVSSHKYAFQGLFKNEFIGLKLARDQDGGNLISDKEILTKIWQVEMGHSKWVDLAILLGIIVLYRIMFLVITKGKEKMKA. 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05364 658 Gene3D - 60 302 IPR027417 -
Seca11g05364 658 Pfam ABC-2 type transporter 382 595 IPR013525 GO:0016020|GO:0140359
Seca11g05364 658 Pfam ABC transporter 81 231 IPR003439 GO:0005524
Seca11g05364 658 Pfam ABC-2 type transporter 263 328 IPR043926 GO:0140359
Seca11g05364 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
Seca11g05364 658 SMART AAA_5 89 283 IPR003593 GO:0016887
Seca11g05364 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 295 IPR027417 -
Seca11g05364 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 48 657 - -
Seca11g05364 658 FunFam ABC transporter G family member 11 58 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05364 Seca-Chr11 151046972 151052029 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05364 90 267 Calmodulin-binding Proteins AT2G36910 27.660 3.97e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05364 K05681 - gmx:100784793 1096.26