Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05362 ATGTCCAAAGCAGAGAAGAAAGAGAGAGCTGATTTTACAATTAGAGAAATGGGTTTGCAAGATGCAATTAACACAAGAATTGGAGGGTGGGCTGTTAAAGGAATTAGTGGGGGTCAAAAGAGAAGAGTGAGCATTTGCATTGAGATCCTAACACGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGATTGGATAGTGCTGCTTCCTACTATGTCATGAAAAGAATTGCTACCTTGGATAAAAAAGATGGCATTCAGAGAACTATCATTGCCTCAATCCATCAACCTAGCACTGAAGTTTTTCAACTTTTCCACAACCTCTGTCTTCTATCTTCAGGTAGAACAGTTTACTTTGGACCTGCTTCTGCTGCATGTGAGTTTTTTGCATCAAATGGTTTTCCTTGTCCTGCCCTCCAGAATCCATCTGATCATTTACTTAAAACTATAAATAAGGATTTTGATCAGGATATTGAGGAGGGTTTGGAAGGGAGTGGAACAATACCCACAGAAGAAGCAATTCGCATCCTTGTGAGTTCATATAAATCATCTGAAATGAACCAACAAGTTCAAAATGAAGTTGCAATACTATCTAAAAAGGACACTGATTCAACGGACAAGAAGAGAAGGCATGCTGGCTTCCTTAATCAGTGTTTAGTTCATACCAAAAGATCTTCCGTGAACATGTTTCGTGATTTAGGCTATTACTGGTTACGCCTTGCCATATATATAGCATTAGCTATAAGTTTAGCTACTGTCTTCTATGATTTGGATAAAAGTAATGGCTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTATCCTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTAGAGGACATGAAGGTATTTGGACGTGAAAGACTAAATGGGCATTATGGTGTTACTGCATATGTCATTGGGAACACCTTTTCGTCTATCCCATACTTGTTTATGGTTTCACTGATTCCTGGAGCTATAGCTTATTACCCTCCTGGTCTTCAAAAAGGATTTGAGCACTTTGTGTATTTTATTTGTGTTCTATTTGCTTGTCTAATGTTAGTAGAGAGCCTTATGATGATTGTGGCTAGCATTGTCCCCAACTTTCTAATGGGTATCATAACTGGTGCTGGAATTCAAGGAATCATGATGTTATGTGGTGGGTTCTTTAGATTGCCAAATGATCTTCCTAAGCCAGTTTGGAAATACCCAATGTTCTATGTTGCCTTCCATAGGTATGCTTATCAAGGAATGTTCAAAAATGAGTTTGAAGGGCTAAAGTTTGAAGGAAGTGAAGTTGTTGGTGGCTCAACTAATTACATTAGTGGTGAAGAGATTCTAAGGAATAGATGGCAAGTAGACATGAGTTACTCAAAGTGGGTTGATTTTGGAATCTTGTTGGCAATGAATGTTCTATATCGTGTTCTATTTTTGGTTATCATCAAAACTACTGAGAAGCTAAAGCCACTTGTTGTATCATTCATGTCGGGGACTCCCAAGCAAACAATACAGATCATGGAGAATCCTAATGCCACTCCTTTACATGGATAA 1566 0.3831 MSKAEKKERADFTIREMGLQDAINTRIGGWAVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIATLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGRTVYFGPASAACEFFASNGFPCPALQNPSDHLLKTINKDFDQDIEEGLEGSGTIPTEEAIRILVSSYKSSEMNQQVQNEVAILSKKDTDSTDKKRRHAGFLNQCLVHTKRSSVNMFRDLGYYWLRLAIYIALAISLATVFYDLDKSNGSIQDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFGRERLNGHYGVTAYVIGNTFSSIPYLFMVSLIPGAIAYYPPGLQKGFEHFVYFICVLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGIMMLCGGFFRLPNDLPKPVWKYPMFYVAFHRYAYQGMFKNEFEGLKFEGSEVVGGSTNYISGEEILRNRWQVDMSYSKWVDFGILLAMNVLYRVLFLVIIKTTEKLKPLVVSFMSGTPKQTIQIMENPNATPLHG. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05362 521 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 501 - -
Seca11g05362 521 Pfam ABC transporter 5 63 IPR003439 GO:0005524
Seca11g05362 521 Pfam ABC-2 type transporter 217 428 IPR013525 GO:0016020|GO:0140359
Seca11g05362 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 137 IPR027417 -
Seca11g05362 521 Gene3D - 1 159 IPR027417 -
Seca11g05362 521 Pfam ABC-2 type transporter 95 204 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05362 Seca-Chr11 150994978 150999423 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05362 19 99 Calmodulin-binding Proteins AT2G36910 38.272 4.91e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05362 K05681 - gmx:100813462 859.751