Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05360 ATGACTTCCTTTCATCCATCTCTTCCAACGGCTCCTAGTAGTGATAATGAAACTAAACACAGATCAAATTCAGTTGCAACTGTCCTAGACATTAAGGTCCCAACACTGGAAATGAAAACTTGTAGTTGTAGAGCTCCAAGAGCTGGGGTTCAAGTTGAGACTCAAACAGAAGAGGGTGTCTGCTTGACATGGAAGGATGTATGGGTGATGACTACTTCCAATAGAAAGAATGGAAGTAAATCAATTCTTCAAGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTAGCCATAATGGGCCCTTCTGGCTGTGGCAAGTCTACACTACTTGATACTTTAGCAGGGAGACTAGGCTCAAACACAAGGCAAACAGGGGAAATTCTTATCAATGGTCACAAGCAAGCACTAGCTTATGGAACTTCGGCATATGTCACTCAAGATGATACCTTACTAACAACCTTAACAGTTAAGGAAGCAGTGCATTACTCAGCTCAACTTCAGTTACCTGATTCAATGTCCAAAGCAGAGAAGAAAGAGAGAGCTGACTTTACAATAAGAGAAATGGGTCTCCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATTAGTGGTGGTCAAAAGAGAAGAGTGAGCATTTGCATTGAGATCCTAACACGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGATTGGATAGTGCAGCTTCCTACTATGTCATGAAAAGAATTGCTACCTTGGATAAAAAAGATGGCATTCAAAGAACTATTATTACATCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCATAACCTCTGTCTTTTATCTTCAGGTAGAACAGTTTACTTTGGACCTGCTTCTGCTGCATGTGAGTTTTTTACTTCAAATGGTTTTCCTTGTCCTGCCCTCCAAAATCCATCTGACCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGATTTTGAGGTGGGTTTAGTAGGGACTGGAACAATACCCACAGAAGAAGCAATCCGTATTCTTGTGCACTCATATAAATCATCTGAATGGAATCAAGAAGTTCAAAATGAAGTAGAATTACAATCTAAAAAGGATACCAGTTCAATTGACAAGAAGAGAGGGCATGCAGGCTTCCTTAATCAATGCATAGTTCTTTACAAAAGATCATCTGTCAACATGTTTCGTGATTTAGGATATTATTGGTTACGCCTTGTTATATATGTTGCATTGGCTATAAGTTTAGGCACTATTTTCTATGACTTGGGCATAAGTAAGGGCTCAATTCAGGATCGAGGTTCACTTCTTTCATTTGTGACTGGATTCTTAACATTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTTCAAAGAGAGAGAGAAAATGGACATTATGGGGTTGTTGCATTTGTAATTGGGAACACCTTTTCATCTCTCCCATACTTGTTATTGGTTTCAGTGATTCCTGGAGCCATAACTTATTACCTTCCTGGTCTTCAGAAAGGGTGTGAACACTTTCTGTACTTCCTCTGTGTTTTATTTTCTAGTCTAATGTTAGTGGAGAGTCTTATGATGATAATTGCCAGCATTGTCCCCAATTATCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATCATGCTTTTACTTGGTGGGTTCTTTAAATTGCCAAATGATCTTCCTAAGGTAGTTTGGAGATACCCTTTACACTATATTGCCTTCCATAGGTATGCCCTCCAAGGATTGTTCAAGAATGAATATGAAGGACTAAGATTTGTTATAGATAAAGGTGGAGAAGGCTCACACAATTACATTAGTGGTGAAGAGGTTTTAAGAAATACTTGGCAAACTGACATGAGTTGCTCAAAATGGGTTGATCTTACTTCCTTTCATCCATCTCTTCCAATAGATCCTAGTAGTGATAATGAAACTAAACAGAGATCAAATTCAGTTGCAACTGTCCTAGACATTGAGGTCCCAACACTGGAAATGAAAACTTGTAGAGCTCCAAGAGCTGGGGTTCAAGTTGAGACTCAAAAAGAAGAGGGTGTCTGCTTGACATGGAAGGATGTATGGGTGATGACTACTTCCAATAGAAAGAATGGAAGTAAATCAATTCTTCAAGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTAGCCATTATGGGACCTTCTGGCTGTGGCAAGTCTACGCTACTTGATACTTTAGCAGGGAGACTAGGCTCAAACACAAGGCAAACAGGGGAAATTCTGATCAATGGTCACAAGCAAGCACTAGCTTATGGAACCTCGGCATATGTCACACAAGATGATACCTTACTAACAACCTTAACAGTTAAGGAAGCAGTGCATTACTCAGCTCAACTCCAATTGCCTGATTCAATGTCCAAAGCAGAGAAGAAAGAGAGAGCTGATTTTACAATCAGAGAAATGGGTCTCCAAGATGCAATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATTAGTGGTGGTCAAAAGAGGAGAGTGAGCATTTGCATTGAGATCCTAACACGCCCTACACTTCTCTTTCTTGATGAACCAACTAGTGGATTGGATAGTGCTGCTTCCTACTATGTCATGAAAAGAATTGCTACCTTGAGTAAAAAAGATGGCATTCAGAGAACTATCATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCACAACCTCTGTCTTTTGTCTTCAGGTAGAACAGTTTACTTTGGACCTGCTTCTAATGCATGTGAGTTTTTCGCTTCAAATGGTTTTCCTTGTCCTACCCTTCAGAATCCATCTGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGATATTGAGGTGGGTTTAGCAGGGACAATACCCGCAGAAGAAGCAATTCGTATCCTTGTGAGCTCATATAAATCTTCTGAATGGAACCAAGAAGTTCGTAACGAAGTAACATTAATGTCGGCTAAAAAGGACAGCAGCTCCATAGACCAGAAGAGAAGGCATGCAAGCTTCCTTACTCAGTGCTCAGTTCTTCTCAGAAGATCGTCCGTGAACATGTTTCGTGATATAGGCTATTATTGGTTACGCCTTGTCATATACGTTGCATTGGCTATAAGTTTAGGCACCGTTTTCTATGATTTGGGTACAAGTTATGACTCAATTAAGGATCGAGGTTCACTTCTCTCGTTTGTGGTTGGCTTCTTAACCTTCATGAGCATTGGTGGGTTCCCTTCATTTGTAGAAGACATGAAGGTATTTAAACGTGAAAGACAAAACGGACATTATGGTGTTATTGCTTTTGTCATTGGGAACACCTTTTCAGCAATCCCCTACTTGTTATTGGTTACGGTGATTTCTGGAGCTATAGCTTATTACCTTCCTGGTCTTCAAAGAGATTGGGAGCGCATTTTGTACTTCTTTTGTGTTTTATTTTCTAGTATGATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGCATTGTCCCCAACTATCTAATGGGAATAATAACTGGAGCTGGAATTCAAGGAATGATGATATTAGTTGCTGGGTTCTTCAAATTGCCAAATAATCTTCCTAAGCCATTTTGGAAATACCCAATACACTATATTGCCTTCCATAGGTATGCCTTCCAAGGATTGTTCAAAAATGAGTATGAAGGACTAATATTTACCACAAATGATGATGAAGGAGGCTCACACAAGTACATTAGTGGTGAAGAGGTTCTAAGAAATACTTGGCAAACTAACATGAGTTACTCAAAATGGGTTGATCTTGCAGTTTTGCTAGGGATGATTGTTTTCTATCGGATTTTGTTCTTTATTATCATCAAGACTACTGAGAAGGTGAAGCCCATTGTTGGATCATTATCATGCATGTCAGTGTCTCCCAAGCAAACAATACAGGTGGTGGAGAACCCCAATGCCACACCTATACATGGAGAGGTATGA 3996 0.3969 MTSFHPSLPTAPSSDNETKHRSNSVATVLDIKVPTLEMKTCSCRAPRAGVQVETQTEEGVCLTWKDVWVMTTSNRKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQALAYGTSAYVTQDDTLLTTLTVKEAVHYSAQLQLPDSMSKAEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIATLDKKDGIQRTIITSIHQPSTEVFQLFHNLCLLSSGRTVYFGPASAACEFFTSNGFPCPALQNPSDHLLKTINKDFDQDFEVGLVGTGTIPTEEAIRILVHSYKSSEWNQEVQNEVELQSKKDTSSIDKKRGHAGFLNQCIVLYKRSSVNMFRDLGYYWLRLVIYVALAISLGTIFYDLGISKGSIQDRGSLLSFVTGFLTFMTIGGFPSFVEDMKVFQRERENGHYGVVAFVIGNTFSSLPYLLLVSVIPGAITYYLPGLQKGCEHFLYFLCVLFSSLMLVESLMMIIASIVPNYLMGIITGAGIQGIMLLLGGFFKLPNDLPKVVWRYPLHYIAFHRYALQGLFKNEYEGLRFVIDKGGEGSHNYISGEEVLRNTWQTDMSCSKWVDLTSFHPSLPIDPSSDNETKQRSNSVATVLDIEVPTLEMKTCRAPRAGVQVETQKEEGVCLTWKDVWVMTTSNRKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQALAYGTSAYVTQDDTLLTTLTVKEAVHYSAQLQLPDSMSKAEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPTLLFLDEPTSGLDSAASYYVMKRIATLSKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGRTVYFGPASNACEFFASNGFPCPTLQNPSDHLLKTINKDFDQDIEVGLAGTIPAEEAIRILVSSYKSSEWNQEVRNEVTLMSAKKDSSSIDQKRRHASFLTQCSVLLRRSSVNMFRDIGYYWLRLVIYVALAISLGTVFYDLGTSYDSIKDRGSLLSFVVGFLTFMSIGGFPSFVEDMKVFKRERQNGHYGVIAFVIGNTFSAIPYLLLVTVISGAIAYYLPGLQRDWERILYFFCVLFSSMMLVESLMMIVASIVPNYLMGIITGAGIQGMMILVAGFFKLPNNLPKPFWKYPIHYIAFHRYAFQGLFKNEYEGLIFTTNDDEGGSHKYISGEEVLRNTWQTNMSYSKWVDLAVLLGMIVFYRILFFIIIKTTEKVKPIVGSLSCMSVSPKQTIQVVENPNATPIHGEV. 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05360 1331 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 698 945 IPR003439 GO:0005524
Seca11g05360 1331 FunFam ABC transporter G family member 11 696 985 - -
Seca11g05360 1331 FunFam ABC transporter G family member 11 60 351 - -
Seca11g05360 1331 ProSitePatterns ABC transporters family signature. 842 856 IPR017871 GO:0005524|GO:0016887
Seca11g05360 1331 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524|GO:0016887
Seca11g05360 1331 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 689 1305 - -
Seca11g05360 1331 Pfam ABC transporter 84 234 IPR003439 GO:0005524
Seca11g05360 1331 Pfam ABC transporter 720 870 IPR003439 GO:0005524
Seca11g05360 1331 Gene3D - 63 301 IPR027417 -
Seca11g05360 1331 Gene3D - 699 937 IPR027417 -
Seca11g05360 1331 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 309 IPR003439 GO:0005524
Seca11g05360 1331 SMART AAA_5 92 281 IPR003593 GO:0016887
Seca11g05360 1331 SMART AAA_5 728 917 IPR003593 GO:0016887
Seca11g05360 1331 Pfam ABC-2 type transporter 266 320 IPR043926 GO:0140359
Seca11g05360 1331 Pfam ABC-2 type transporter 902 956 IPR043926 GO:0140359
Seca11g05360 1331 Pfam ABC-2 type transporter 1022 1234 IPR013525 GO:0016020|GO:0140359
Seca11g05360 1331 Pfam ABC-2 type transporter 388 599 IPR013525 GO:0016020|GO:0140359
Seca11g05360 1331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 300 IPR027417 -
Seca11g05360 1331 MobiDBLite consensus disorder prediction 1 23 - -
Seca11g05360 1331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 700 936 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05360 Seca-Chr11 150944733 150960959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05360 718 931 Calmodulin-binding Proteins AT2G36910 28.182 8.77e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05360 K05681 - gmx:100794527 1934.07