Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05355 ATGACTACCCTTTCTTATCCACTTGCTCAACCTAAGGTTTTGCAAACTGGTCCACAAGTTTTTACCACATTTGAAGTTGATACCATCAAGTCAACAGAAATCAATGGAAGTGATGAGAAGGAGAGCATAACAGTTACATGGGAGAATTTGTGGGTCACTGTTCCAAATGGAAAGAAAAGGAAACCAATTCTTCATGGTCTTACAGGTTATGCCCAGCCAGGAAGGCTTCTGGCTATAATGGGTCCTTCAGGCTGTGGAAAATCCACTCTTCTTGATGCTTTAGCAGGAAGATTAAGCTCAAACATAAAGCACACAGGAAATATTCTAATCAATGGTCACAGACAAGCACTAGCTTATGGAATATCAGTAAGAGAAAATTCCCAAAAGCTACAAGTCCTAAAGAAAAAAGGCTATGTAACACAAGATGATGCTATGCTGTCAACTTTAACAGCTGGGGAAACTCTATACTACTCAGCTCAGCTTCAATTTCCAGATTCTATGTCCATAACAGAGAAGAAAGAACAAGCAGACATCATACTCAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTAAGTGGGGGGCAAAAGAGGAGACTCAGCATTTGCATTGAGATTCTAACACGCCCCAGACTTCTATTCCTTGATGAACCAACTAGTGGCCTTGATAGTGCTGCTTCCTATTATGTTATGAGTAGAATTGCAAGTCTAAATCTAAGGGACAGCATTAGAAGGACCATTGTTGTATCCATTCATCAACCAAGCAGTGAAGTTTTTCAACTTTTCCATGACCTCTGTCTTCTGTCTTCAGGTGAAACAGTGTATTTTGGTCCTGCCCCTGATGCAAATCAGTTTTTTGCTACAAATGGTTTTCCTTGCCCAACTCTCCACAATCCTTCTGATCACTACTTAAGGATCATCAACAAAGATTTCGAACAGGATGTTGAAGAAGGATTTTGTAAAGGAGCAACTACAGAAGAAGCAATTCGTATCCTTGTAAAGTCTTATAGATCGTCTCAAATTAGGAAACAAGTTAAAAACGAAGTGGCAAAAATAAGTGAAAGTGACTCTGGGGCAATAGGGAAGAGGAGAATCCATGCTGCATTCCTCACTCAATGCCTTGTTCTTATAAGGAGATCTTCTTTGCAATTGTTTCGTGACATAAGCAATTACTGGTTACGTTTAGCTGTCTTTATTGTAATAGCTATAAGCATTGGCTCTATCTTCTATGACATTGGCTTAAGTTATGGATCTATTCAGGGCAGAGGTTCGCTGCTCACATTTCTTATTTCAGTTTTGACTTTCATGACCCTTGTTGGTGGATTCTCTCCACTTTTGGAGGAAATGAAGGTATTTAAGCGAGAGAGATTGAATGGACACTATGGTGTAACGGCTTTTCTCATTGGCAACATATTCTCTGCCATTCCTTATATGATAATGATCTCTCTGCTTCCTGGAGGAATAGCTTACTACCTTTGTGGGATGCACAAAGGGCTACATCATTTTTTGTACTTCACTTCTTTACTATTTGCCATTGTGATGTGGGTTGAGAGCCTTATGTTAGTTGTTGGGAGCATATCCCCCAATTACGTAATTGGCATGTTTATTACTGGGGGAATTGAAGGACTCATGATTTTAACAGGTGGATTCTATCGGTTACCAAATGATCTTCCCAAACCATTATGGAAGTACCCATTCTACTATGTTTCCTTCCTCAAATATGCCTTCCAAGGATCATTCAAGAATGAATTTGAAGGCTTAATATTTTCTAGAGACCAATATGGAGTCACCAAATCCATTAGTGGTAGAGAAATACTAATTGATACATGGCATGTGGAAATGGATCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTATTTTGTATCGAGTTTTGTTCTTGGTCATCACTAAGAGCAAGGAGAATCTAAAGCCCTTTGCCTTAAGTGGTTCCCAAGCATAA 1998 0.3964 MTTLSYPLAQPKVLQTGPQVFTTFEVDTIKSTEINGSDEKESITVTWENLWVTVPNGKKRKPILHGLTGYAQPGRLLAIMGPSGCGKSTLLDALAGRLSSNIKHTGNILINGHRQALAYGISVRENSQKLQVLKKKGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMSITEKKEQADIILREMGLQDAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDSIRRTIVVSIHQPSSEVFQLFHDLCLLSSGETVYFGPAPDANQFFATNGFPCPTLHNPSDHYLRIINKDFEQDVEEGFCKGATTEEAIRILVKSYRSSQIRKQVKNEVAKISESDSGAIGKRRIHAAFLTQCLVLIRRSSLQLFRDISNYWLRLAVFIVIAISIGSIFYDIGLSYGSIQGRGSLLTFLISVLTFMTLVGGFSPLLEEMKVFKRERLNGHYGVTAFLIGNIFSAIPYMIMISLLPGGIAYYLCGMHKGLHHFLYFTSLLFAIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTGGFYRLPNDLPKPLWKYPFYYVSFLKYAFQGSFKNEFEGLIFSRDQYGVTKSISGREILIDTWHVEMDHSKWVDLAIMFGMIILYRVLFLVITKSKENLKPFALSGSQA. 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05355 665 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 37 658 - -
Seca11g05355 665 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
Seca11g05355 665 FunFam ABC transporter G family member 11 43 344 - -
Seca11g05355 665 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 304 IPR003439 GO:0005524
Seca11g05355 665 Pfam ABC-2 type transporter 261 327 IPR043926 GO:0140359
Seca11g05355 665 Gene3D - 32 299 IPR027417 -
Seca11g05355 665 SMART AAA_5 73 276 IPR003593 GO:0016887
Seca11g05355 665 Pfam ABC-2 type transporter 380 593 IPR013525 GO:0016020|GO:0140359
Seca11g05355 665 CDD ABCG_EPDR 42 286 - -
Seca11g05355 665 Pfam ABC transporter 65 229 IPR003439 GO:0005524
Seca11g05355 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05355 Seca-Chr11 150692433 150697589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05355 39 265 Calmodulin-binding Proteins AT2G36910 30.603 1.50e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05355 K05681 - gmx:100790102 1084.32