Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05337 ATGGTGTGCCAAGCAGCAAGCCAAACAAGATTTCGGGCATTTAAACATGAGAACAGCATTGAAGGTGAATCAACAATTATAGTTAGAGTGATAGCATGCTTTCAACCCTTGCACTATTGTCAGTTTTGTTGGATGGTTAAGGCCGATAGGTCCTGGTGTCAGCCACAGCATGTGGCTTGGCAACCACCTTATTTGAATTGCTTCAGCATGCTGCCAAAGCCCAGCTTACTTGGTCATCCAGCATATCTAAATTCTAGCACTTGCATCTTTCCTGCTGTCAGTACATTTCCGGGGCTTGCATCTCCTGCTATCCCAAATCTGAAGACTGAGCTAAGAAATACAAATGAAGTGCAAGGATTCTATCAGTATCCCAATGCAGGATCGAGCTTCAAAGAAACACATATTGGAGGGGCTTTGCAAAATGGAAATACTGCATCTTTGCAGAAGAAGTTACTGGTCTTTGATCACTCTTGTAATAAGACAAGGTTGTTTTATGGTCCTGCCCTCCCCCTTGTCCAGAGTTCAAATGTTACTGCTACAAAATTTGCTTATGATGTAAATGGGGAGGGACAGGCAAGTAATATGGGTCAAAAGTATCAAGCCAGGTACAGTCTACCAGAAGAGTCTGTTAATGATCATATAGATATTGAAGAAAGTGAAATGCATGAAGACACAGAGGAAATCAATGCATTGCTTTATTCTGATGATGAGAATGATGAAGATGATGATGATAATTCTGATGAGGTAACAAGTACAGACCGTTCCCCTTTGGCAACTAAAAGGACTTATGTAATGCAAGAACAATTTGAAGGTGCAGACGAGGAGGTTGCTAGCTCTGATTGGCCTAACAAAAGGCTGAAGTTAATTGATGGTGGCTATAATAGATCATCCCCACCTGTGGACAGTGTTAGTTTGGTAAAACTAAAGGAAACCTGCGAGTGTGTCAGTGATGCTGAATCAAAGAACTCTAGTGGCTGGGCATATTCTTTTGAGAAAACTAAGGTAGATAATTCAATGGTGGATGATATCAAATTGAAAAGGGATAGGATCCGTGAATCATTGAGAGTTCTTGAGAATTTAATTCCTGGTGCTAAAGGAAAGGAGCCACTGTTAGTCATTGATGGAACTATTGAGTACTTGAAATTTTTGATGTCCCAAACTGGTACACTTGGAGTGAAATATCACTAA 1188 0.4066 MVCQAASQTRFRAFKHENSIEGESTIIVRVIACFQPLHYCQFCWMVKADRSWCQPQHVAWQPPYLNCFSMLPKPSLLGHPAYLNSSTCIFPAVSTFPGLASPAIPNLKTELRNTNEVQGFYQYPNAGSSFKETHIGGALQNGNTASLQKKLLVFDHSCNKTRLFYGPALPLVQSSNVTATKFAYDVNGEGQASNMGQKYQARYSLPEESVNDHIDIEESEMHEDTEEINALLYSDDENDEDDDDNSDEVTSTDRSPLATKRTYVMQEQFEGADEEVASSDWPNKRLKLIDGGYNRSSPPVDSVSLVKLKETCECVSDAESKNSSGWAYSFEKTKVDNSMVDDIKLKRDRIRESLRVLENLIPGAKGKEPLLVIDGTIEYLKFLMSQTGTLGVKYH. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05337 395 Coils Coil 340 360 - -
Seca11g05337 395 PANTHER TRANSCRIPTION FACTOR BHLH145 52 393 IPR037546 -
Seca11g05337 395 MobiDBLite consensus disorder prediction 235 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05337 Seca-Chr11 150453155 150456912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05337 137 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.220 2.54e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05337 - - gmx:100817942 496.123