Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05324 ATGGACGGTGGAAACAGAGCCGAAGCCGAACGGTGGCTCTACACCGCCAACAAGCTCCTTAGCGCGCGTGACCTTCACGGAGCACGCTCCTTCGCGATCCGTGCCCGCGAATCCGACCTGTCCTTCGACGCGTCGGAGCTTCTCTTAACGGTGATCGACACCCTCCTCGCCGGCGAGTCGCGGATCAACGATCACCACCGTGACTGGTACGGGATCCTCCAAATTCTCCGCTACACCACCAACATCGACCACATCGCCGCCCAGTACCGCCGCCTCGCCCTCCTCCTCGACCCTCACCAGAACCCCTTCGCCTTCTCCGGCCACGCGTTCTCCCTCGTCCATGACGCTTGGTCCGTTCTCTCCAACCCTGCCAAGAAGGCCATGTACGACAGCGAGCTCCGGTTGCTCACTACCCCTCCCGCTCCGCCGCAGCCCCAGCCAGTGCCGCCGCCTGCGCCACAGCAGCAGCAACAGCATCAATCTCACTCAACACCGAGGAGAAACCCTAGATCGAGGGACGGCGCGACCGAGCCGACTCGGCAGAATCGGAACCCGAGCGAGCCAACCGAGTCGACTCGGCAGACCCGGACGGCGAATGCCGAGACGGAGAAGGAGGGTAGCGCGAGCTTCTGGACCTCGTGCCCTTACTGTTACGTTCTGTACGAGTACCCCAAGGGGTACGAAGATTGCACCCTGCGATGCCAGGGTTGCCGTAGGGCGTTTCATGCGGTGGTGATACGGCCACCGCCGTTGAACGGGAAAGATTTTTCCTTTTGCAGTTGGGGATTTTTCCCGTTAGGGTTTTCTGGAAATTGCAAAGATATTAATGGGGCTTCTTCTAATTGGAACCCATTTTCCCCTCTGTTTCCCTGCCCCTTGAAAGGATCATCCGGTAGGAAAAGGAATTGGGTTTACTATGATGATGAGGCTGCTGCGGCGTTTATTGATATTTCTGATCCAAGTGAGGATGATTCTGATGATGGGGACTGGAGGGGTGGGAGGAAAAGGGGTAGGAAGAGGTCAAGGGTTTCTAAGAGATCTGGTGATGCAAGGAGGGAACCCATAGAGAGACCTAGGAGGGGTGTTGCTGGTGCTGGTAGTGCAGGGCATGGAAATGTTGGTACTGGTGCTGTTGAACATGCTGCTGGTGCTGGTGCTGGTTCTAGTGCAAGGGCAGAGTCTAGTAAGAAAGCTGCATTGGGTAGTTCCAGGAGGAGGGGTGCAGGGAATCTGGGGAAGTTGGATTTGAATGTGGAGTTCAGTAATGAGGCAGAAGAGCCTTCGCGTGGAGTGCGTGATCGGGAAGGGAATGCAACTGGCAATGCTGAGGATAATATTGAAGGAATTGGATTTTTTGAGGGGCTTGATGAATTCCTCAGTAGCTTACCCATCCTCAATGTTGTCGGAGATGATAAGGTTAAGGGTCATTAG 1431 0.5597 MDGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDLSFDASELLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIAAQYRRLALLLDPHQNPFAFSGHAFSLVHDAWSVLSNPAKKAMYDSELRLLTTPPAPPQPQPVPPPAPQQQQQHQSHSTPRRNPRSRDGATEPTRQNRNPSEPTESTRQTRTANAETEKEGSASFWTSCPYCYVLYEYPKGYEDCTLRCQGCRRAFHAVVIRPPPLNGKDFSFCSWGFFPLGFSGNCKDINGASSNWNPFSPLFPCPLKGSSGRKRNWVYYDDEAAAAFIDISDPSEDDSDDGDWRGGRKRGRKRSRVSKRSGDARREPIERPRRGVAGAGSAGHGNVGTGAVEHAAGAGAGSSARAESSKKAALGSSRRRGAGNLGKLDLNVEFSNEAEEPSRGVRDREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNVVGDDKVKGH. 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05324 476 MobiDBLite consensus disorder prediction 419 440 - -
Seca11g05324 476 MobiDBLite consensus disorder prediction 138 154 - -
Seca11g05324 476 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 354 - -
Seca11g05324 476 MobiDBLite consensus disorder prediction 317 445 - -
Seca11g05324 476 MobiDBLite consensus disorder prediction 178 204 - -
Seca11g05324 476 Pfam DnaJ domain 68 130 IPR001623 -
Seca11g05324 476 Gene3D DnaJ domain 62 137 IPR036869 -
Seca11g05324 476 SUPERFAMILY Chaperone J-domain 64 134 IPR036869 -
Seca11g05324 476 MobiDBLite consensus disorder prediction 135 204 - -
Seca11g05324 476 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Seca11g05324 476 CDD DnaJ 68 122 IPR001623 -
Seca11g05324 476 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Seca11g05324 476 SMART dnaj_3 67 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05324 Seca-Chr11 150245197 150246627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05324 8 475 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.684 5.61e-107 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05324 - - cam:101509006 656.366