Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05320 ATGCATCAGGTAATTGAAAGGCGTAATCGGCATTCAGCAATTCATAGATTAGACCACCCATCTATTGAGATGCAGGTAGAGAATGACTCTAACGACACGCTGCGCAAGAAAGTAGAAGATAGGACTCATGAGCTGAGGCAGTTGAAGGGGGAAGAGCTGCAAGGATTGACATTACAAGAACTCCAGAAACTAGAGGAACTGCTCAAAAGAGGTTTGAGCAGTGTTTCAAAAGCAAAGGATGAAAAGTTTATGCAAGACATAAGCGCCCTTAGGAGAAAGGGAGTGGAACTGATTGAAGAAAACCAAAAATTGAAACAGGTACCAAGTTTTATACATGGACAAAGGCAATCACTGGAATCCATTATTAGTAGTTCATCTCATCTTCCTGAAGACCATGTCAGTGACACATCTCTCAAGTTGGGGTTATCTTTACTTAAATAA 441 0.4082 MHQVIERRNRHSAIHRLDHPSIEMQVENDSNDTLRKKVEDRTHELRQLKGEELQGLTLQELQKLEELLKRGLSSVSKAKDEKFMQDISALRRKGVELIEENQKLKQVPSFIHGQRQSLESIISSSSHLPEDHVSDTSLKLGLSLLK. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05320 146 Coils Coil 87 107 - -
Seca11g05320 146 ProSiteProfiles K-box domain profile. 24 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca11g05320 146 Pfam K-box region 31 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca11g05320 146 Coils Coil 31 51 - -
Seca11g05320 146 Coils Coil 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05320 Seca-Chr11 150204648 150211167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05320 1 142 MADS-box Gene Family AT2G22540 38.286 2.79e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05320 - - aprc:113860188 168.703