Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05287 ATGGCAGCATCTCCATACTGTCAGAAAAGCTATCTACTTTCTTCTCTTCATATAACAATAACACTCTTGCTTGTTGCAACATCTCGTGCAGCTCCATTAGCGTTCAACTATCAGCATCTGGGTACCACACCAAGTGCCTTCAATTTTTCAGCAGATGTCTCTCAAGACAAAGAAGTCCTCCAACTCACCAGGTCCAAGAGAGACAGCCTTGGCAGAGTCATATATTCCAAACAGCTGCATCTTTGGGACAAGAATTCAGGTAAAGTCACAGACTTTACTACTAGTTTCTCCTTTACCATCAACACACCAAACAAAACCCATCATGGGGATGGCATCACCTTCTATCTGGCACAGCCTAACTTTCCATTACCAGTTCCAAGAGATGGAAGTGGTATTGGTCTAGTGAGCCGTGATCAATTGAATGAACCAAATTACACAAAAGAACATCCATTTGTAGCAGTTGAATTTGATACCTTTGTCAATGATTGGGATCCTAGATATGACCATGTGGGAATTGATATTAACTCCATTAGCACTGCTTACACTACACAATGGTTCACTAGTATGGATGAGAGAGGATATGATGCTGATATTAGTTACAATTCTAGTTCAAACAATTTAAGTGTCACCTTCACTGGATATCAGGATAACATCACAATTAAACAGCACTTGTACTATGTAGTCAATCTGAGAGATGTTCTACCTGATTGGGTTGAATTTGGCTTCTCTTCAGCAACCGGGGATTTTTTTGAGGAACATACTCTTAGCTCATGGTCCTTCAACTCTAGTTTAGACTTTGAAGCAGACAAGGGTGAAAGCAAAACAGGGTTGGTGATAGGGCTGAGCATTGGTGCAGGGGTTTCAATTGGTGTTTTGATGCTAGCTTGCCTTGTAACATGGAAGCTGAGGAAAAGAGGCATGAGGGATGATTTGCAATTTGATCTTGCTATGGATAATGATTTTGAAAGAAGCTCAATACCTAGGAAGTTTTCTTATGAAGAACTTGCTAGAGCAACTAATAACTTTGCAAAGGAACAGAAAATTGGACAGGGAGGTTTTGGTGGAGTGTATAAAGGATTTATAAGAGACTTGAACACTCATGTTGCCATTAAGAAGGTGTCTCAGGGATCTAAACAAGGGGTGAAGGAGTATGCATCTGAAGTAAAGATCATTAGTCAACTTAGGCATAAGAATTTGGTTCAACTTTATGGGTGGTGTCACAGGCAGAATGACCTGCTACTGATTTATGAGTTTGTGGAAAATGGAAGTTTAGATTCTTATCTGTTTAAAGGAAAAGGACTGTTGAAATGGGCAGTGAGATATAATATTGCTAGAGGCCTGGCCTCAGCATTATTGTACCTTCATGAAGAGTGGGAGAAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTTATGTTGGATTCTAATTTTAATGCAAAGCTTGGAGATTTTGGGTTAGCCAGACTAATGAACCATGGGACAGAATCAAAGACAACAAGTTTAGCAGGAACATTTGGATATCTTTCTCCTGAAGCTGCTACAAGAGGCAAGGCTAGTAGAGAGTCTGATGTATATAGTTTTGGAGTTGTTGCTTTGGAGATAGCCTGTGGTAGAAAGGTAATTGAACCTAATCTCAATGAAGAACACATCCATTTGGTGGATTGGGTTTGGGAACTCTATGGCAAAGGTGATCTCCTTAAAGCAGCTGATTCAAGATTGTATGGAGAACTTGATGAGAAGGAAGTAGAGAGGTTAATGATTGTTGGCCTTTGGTGTACTCACATAGATTACATTCAGAGGCCTATGATTAGGCAAGCTGTTCAGGTGCTTAATTTTGAAGCTCCACTACCTACTCTCCCATCACAGGTGCCTCCCTCTACCTATAATAGATCTTTGAGCTCTATGGCATCTGGGACTCCTGTATTTGGGAATAACCAATCTGTACCCTCAACTTCAAGCAATAGCTCCTTCACTGGATCCTCACAATCAAGCAAAACTTTTGAAGTCATCTCTCCTTCAGCTGCACTTCTATATACTTGCTGA 2046 0.4042 MAASPYCQKSYLLSSLHITITLLLVATSRAAPLAFNYQHLGTTPSAFNFSADVSQDKEVLQLTRSKRDSLGRVIYSKQLHLWDKNSGKVTDFTTSFSFTINTPNKTHHGDGITFYLAQPNFPLPVPRDGSGIGLVSRDQLNEPNYTKEHPFVAVEFDTFVNDWDPRYDHVGIDINSISTAYTTQWFTSMDERGYDADISYNSSSNNLSVTFTGYQDNITIKQHLYYVVNLRDVLPDWVEFGFSSATGDFFEEHTLSSWSFNSSLDFEADKGESKTGLVIGLSIGAGVSIGVLMLACLVTWKLRKRGMRDDLQFDLAMDNDFERSSIPRKFSYEELARATNNFAKEQKIGQGGFGGVYKGFIRDLNTHVAIKKVSQGSKQGVKEYASEVKIISQLRHKNLVQLYGWCHRQNDLLLIYEFVENGSLDSYLFKGKGLLKWAVRYNIARGLASALLYLHEEWEKCVLHRDIKSSNVMLDSNFNAKLGDFGLARLMNHGTESKTTSLAGTFGYLSPEAATRGKASRESDVYSFGVVALEIACGRKVIEPNLNEEHIHLVDWVWELYGKGDLLKAADSRLYGELDEKEVERLMIVGLWCTHIDYIQRPMIRQAVQVLNFEAPLPTLPSQVPPSTYNRSLSSMASGTPVFGNNQSVPSTSSNSSFTGSSQSSKTFEVISPSAALLYTC. 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05287 681 FunFam L-type lectin-domain containing receptor kinase IX.1 327 418 - -
Seca11g05287 681 Pfam Protein kinase domain 343 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05287 681 FunFam L-type lectin-domain containing receptor kinase IX.1 31 273 - -
Seca11g05287 681 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Seca11g05287 681 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Seca11g05287 681 PANTHER - 49 621 - -
Seca11g05287 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 264 IPR013320 -
Seca11g05287 681 MobiDBLite consensus disorder prediction 644 664 - -
Seca11g05287 681 Gene3D Transferase(Phosphotransferase) domain 1 419 632 - -
Seca11g05287 681 Pfam Legume lectin domain 34 272 IPR001220 GO:0030246
Seca11g05287 681 SUPERFAMILY Protein kinase-like (PK-like) 325 636 IPR011009 -
Seca11g05287 681 CDD lectin_legume_LecRK_Arcelin_ConA 33 264 IPR001220 GO:0030246
Seca11g05287 681 ProSiteProfiles Protein kinase domain profile. 342 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05287 681 Gene3D - 32 278 - -
Seca11g05287 681 ProSitePatterns Protein kinases ATP-binding region signature. 348 372 IPR017441 GO:0005524
Seca11g05287 681 FunFam Lectin-domain containing receptor kinase A4.3 419 631 - -
Seca11g05287 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Seca11g05287 681 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Seca11g05287 681 CDD STKc_IRAK 348 612 - -
Seca11g05287 681 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05287 Seca-Chr11 149647040 149649085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05287 33 630 Receptor kinase-like Gene Family AT5G10530 46.318 2.88e-177 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca11g05287 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05287 - - cam:101491058 1025