Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05284 ATGCCAAATGGAAGCTTAGATGTTCATCTTTTCAAGAAACAAAGCTTTTTGAAATGGGAAGTGAGAGACATAAAATCAAGCAACATAATGCTAGATGCAGAGTTTAATGCAAAACTTGGGGATTTGGGTTTAGCAAGGTTTGTTGATCATGCAAAAGGTGCACAAAGCAAGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATATCCCGAAAAGCCCAAGAAAATGAAATAAATATTGTGGAGTGGGTCTTGGATCTCTATGGAAAAGGAAAAATTCTTGAAGCAGCAGATCCAAGACTAGGTGGAGATTTTGAAGAGGAGAAAATAAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGATCATACTAATAGGCCTTCAATGAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCCCTACCCAATCTTCCATCAAATCTGCCTGTACCAACATATGCTGAGCGCCCACTGAACATATATCTAACTTCATTCAGCACAAATGCTTCAGAGGAAGGCCAGACCCAGAGCATAATGTTTAGTACTTCAAACACAAACTCCTCTGGGTTCACCTCAACTTCTAATGATATTTCACCCTCTATTTCGCTCCTATACTCTAGGTAA 669 0.3976 MPNGSLDVHLFKKQSFLKWEVRDIKSSNIMLDAEFNAKLGDLGLARFVDHAKGAQSKASKESDVYSFGVVALEIACGRKPISRKAQENEINIVEWVLDLYGKGKILEAADPRLGGDFEEEKIKCLMIVGLWCAHPDHTNRPSMRQAIQVLNFEAPLPNLPSNLPVPTYAERPLNIYLTSFSTNASEEGQTQSIMFSTSNTNSSGFTSTSNDISPSISLLYSR. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05284 222 Gene3D Transferase(Phosphotransferase) domain 1 1 171 - -
Seca11g05284 222 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05284 222 FunFam Lectin-domain containing receptor kinase A4.3 53 170 - -
Seca11g05284 222 PANTHER - 1 160 - -
Seca11g05284 222 SUPERFAMILY Protein kinase-like (PK-like) 1 176 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05284 Seca-Chr11 149574253 149575050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05284 1 168 Receptor kinase-like Gene Family AT5G10530 50.000 2.51e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca11g05284 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05284 - - gmx:100781258 321.627