Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05283 ATGGGTGAGGATCTTGGAAGGGGAACAGGACCCAAGAAGTATTCATATGCAGAATTAGCAAATGCATCTAATAATTTCAAAGATGAGCATAAGCTAGGTCAGGGAGGATTTGGAAGTGTTTATAGGGGTTATCTTAAAGAAATAAAGTCTTATGTTGCTATTAAGAGGGTGTCAGAAGGTTCTGGTCAAGGGATTAAGGAGTTTGCATCTGAAGTAAGAATTATTAGCCGGTTAAGGCACCGAAATCTAGTGCAATTGCTTGGTTGGTGTCATGAAAGGAAAAAGCTTTTGCTTGTATATGAGTACATGCCAAATGGAAGCTTAGATGTTCATCTTTTCAAGAAACAAAGCTTGTTGAAATGGGCAGTTAGATATACAATAGCTCGAGGCTTGGCTTCAGCATTGCTATACTTGCATGAAGAATGGGAACAGTGTGTTGTACATAGAGACATAAAATCAAGCAACATAATGCTAGATGCAGAGTTTAATGCAAAACTTGGGGATTTTGGTTTAGCAAGGTTTGTTGATCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGGACTATGGGCTACATGGCACCTGAATGTGTTATTACTGGCAGGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATATGCCCGAAGGCCCAAGAAAATGAAATAAATATTGTGGAGTGGGTCTGGGATCTCTATGGAAAAGGGAAAATTCTTGAAGCAGCAGATCCAAGACTAGGTGGAGATTTTGAAGAGGAGAAAATAAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGATCATACTAATAGGCCTTCAATGAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCCCTACCCAATCTTCCGTCAAGTCTTCCTGTACCAACATATGCTGAGCGCCCACTGAACATATCCCTAACTTCATTCAGCACAAATGCTTCAGAGGAAGGCCAGACCCAGGGCCTTAATTTCCCCTATCATTTCTTGTTATCCATTTTCTTAGTACTCTTGATTATCCCATATGCATACTCTTTATCCTTTAACTTCACTAGCTTTAGTCCTAATGACAAGAACATTATATATGAGGGAGCGGCAAATCCTACAACATCAGGTATCCAACTTACTATAAACCAGCGAGGAAAGCTCATGAATGGAAGTATTGGTCGAGCCACATATTACGAACCTATCCAACTTTGGGACAAAACCACTAGGAATCTCACAGACTTCACAACCCATTTCACTTTCACCATAGATTCACGGAATCGAAATGTATATGGAGATGGGATTGCATTCTTTCTTGCCCCTGCAGGTTCAAAGATGCCTAATGCCACAAAAGGAGGTTCTTTTGGTCTGACATTGGATAATCAAAGATTGAACTCCACTGACAATCCATTTGTTGCTGTGGAGTTTGATATCTATCACAACATCTATGATCCGCCCAAGGAACATGCTGGAATAGACATCAACTCTGTGAGATCTATTGCTAATGTGACATGGTTAGCTGATATCAAGGAAGGGAAACTCAATGAGGCATGGATCAGTTACAATTCTAGTTCACAAAATTTAAGTATCATATTCACTGGTTTTAAAAATGCCACCTCCACCATCCTAAAGCAACATCTATCTGCCATAGTTGATCTGAGACTTTGTCTGCCTGAATTGGTTACTGTTGGCTTCTCAGCTGCCACAGGAAATGCAACTGCTATACATAGTATCCAATCATGGGATTTTAGCTCAACTTTGGAAGCACAACGAAACATAACAAACAAAGCTCCTAGTCAAAAGAAAAATTCCAAGATAGGACTGGAAGTGGGATTGAGTATTGGTGGATTTGTTTTAATTGGTGGATTGGGTTTAATCTCAATTGGGTTGTGGAAGAAGAGGAAGAAAGGAACTAAAGAGGAAGATCATGATTTTGAAGAGTACATGGGTGAGGATCTTGGAAGGGGGACAGGACCCCGGAAGTATTCATATGCAGAATTAGCAAATGCATCTAATAATTTCAAAGATGAGCATAAACTAGGTCAGGGAGGATTTGGAGGTGTTTATAGGGGTTATCTTAAAGACATAAAATCTTATGTTGCTATTAAGAGGGTGTCAGAAGGTTCTGGTCAAGGGATTAAGGAGTTTGCATCAGAAGTACGAATTATTAGCCGGTTAAGGCATCGAAATCTGGTGCAATTGATTGGTTGGTGTCATGAAAGAAAAAAACTCTTGCTTGTGTATGAGTACATGCCAAATGGAAGCTTAGATGTTCATCTTTTCAAGAAACAAAGCTTGTTGAAATGGGCAGTGAGATATACAATAGCTCGAGGCTTGGCTTCTGCATTGCTATACTTGCATGAAGAATGGGAACAGTGTGTTGTACATAGAGACATAAAATCAAGCAACATAATGCTAGATGCAGAGTTTAATGCAAAACTGGGAGATTTTGGTTTAGCAAGGTTTGTGGACCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGGACTATGGGCTACATGGCACCTGAATGTGTTATTACGGGCAGGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGGAGGAAACCCATAAGCCTTAAGGCCCAAGAAAATGAAATAAATATTGTGGAGTGGGTCTGGGGGCTTTATGGAAAGGGGAGAATTCTTGAAGCAGCAGATCCAAGACTAGGTGGAGATTTTGAAGAGGACCAAATCAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGATCATAAAAATAGGCCTTCAATAAGGCAAGCAATTCAAGTTCTTAACTTCGAAGCTCCCCTGCCCCATCTTCCATCAAGTGTACCTGTACCAACTTATGTTGACAGCCCACTGAACAAATCCGTAGCTTCATTCAGCATAAATGCTTCGAAGAAAGGCCAGAATCAGAACATAAACTTTAGTTCAAACACAAACTCCTCTGGGTTCACCACAACCTCTGATGATGTTTCTCCTTCTATATAG 3057 0.405 MGEDLGRGTGPKKYSYAELANASNNFKDEHKLGQGGFGSVYRGYLKEIKSYVAIKRVSEGSGQGIKEFASEVRIISRLRHRNLVQLLGWCHERKKLLLVYEYMPNGSLDVHLFKKQSLLKWAVRYTIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDAEFNAKLGDFGLARFVDHAKGAQTTALAGTMGYMAPECVITGRASKESDVYSFGVVALEIACGRKPICPKAQENEINIVEWVWDLYGKGKILEAADPRLGGDFEEEKIKCLMIVGLWCAHPDHTNRPSMRQAIQVLNFEAPLPNLPSSLPVPTYAERPLNISLTSFSTNASEEGQTQGLNFPYHFLLSIFLVLLIIPYAYSLSFNFTSFSPNDKNIIYEGAANPTTSGIQLTINQRGKLMNGSIGRATYYEPIQLWDKTTRNLTDFTTHFTFTIDSRNRNVYGDGIAFFLAPAGSKMPNATKGGSFGLTLDNQRLNSTDNPFVAVEFDIYHNIYDPPKEHAGIDINSVRSIANVTWLADIKEGKLNEAWISYNSSSQNLSIIFTGFKNATSTILKQHLSAIVDLRLCLPELVTVGFSAATGNATAIHSIQSWDFSSTLEAQRNITNKAPSQKKNSKIGLEVGLSIGGFVLIGGLGLISIGLWKKRKKGTKEEDHDFEEYMGEDLGRGTGPRKYSYAELANASNNFKDEHKLGQGGFGGVYRGYLKDIKSYVAIKRVSEGSGQGIKEFASEVRIISRLRHRNLVQLIGWCHERKKLLLVYEYMPNGSLDVHLFKKQSLLKWAVRYTIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDAEFNAKLGDFGLARFVDHAKGAQTTALAGTMGYMAPECVITGRASKESDVYSFGVVALEIACGRKPISLKAQENEINIVEWVWGLYGKGRILEAADPRLGGDFEEDQIKCLMIVGLWCAHPDHKNRPSIRQAIQVLNFEAPLPHLPSSVPVPTYVDSPLNKSVASFSINASKKGQNQNINFSSNTNSSGFTTTSDDVSPSI. 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05283 1018 Pfam Protein kinase domain 684 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05283 1018 Pfam Protein kinase domain 26 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05283 1018 FunFam Lectin-domain containing receptor kinase A4.3 761 973 - -
Seca11g05283 1018 Gene3D - 359 609 - -
Seca11g05283 1018 MobiDBLite consensus disorder prediction 994 1018 - -
Seca11g05283 1018 Gene3D Phosphorylase Kinase; domain 1 669 760 - -
Seca11g05283 1018 Gene3D Phosphorylase Kinase; domain 1 11 102 - -
Seca11g05283 1018 FunFam L-type lectin-domain containing receptor kinase IX.1 359 606 - -
Seca11g05283 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Seca11g05283 1018 ProSiteProfiles Protein kinase domain profile. 26 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05283 1018 Pfam Legume lectin domain 360 604 IPR001220 GO:0030246
Seca11g05283 1018 FunFam L-type lectin-domain containing receptor kinase IX.1 669 760 - -
Seca11g05283 1018 SUPERFAMILY Protein kinase-like (PK-like) 668 975 IPR011009 -
Seca11g05283 1018 FunFam Lectin-domain containing receptor kinase A4.3 103 315 - -
Seca11g05283 1018 PANTHER - 384 960 - -
Seca11g05283 1018 Gene3D Transferase(Phosphotransferase) domain 1 103 316 - -
Seca11g05283 1018 Gene3D Transferase(Phosphotransferase) domain 1 761 974 - -
Seca11g05283 1018 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Seca11g05283 1018 ProSiteProfiles Protein kinase domain profile. 684 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05283 1018 SMART serkin_6 684 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05283 1018 SMART serkin_6 26 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05283 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Seca11g05283 1018 FunFam L-type lectin-domain containing receptor kinase IX.1 11 102 - -
Seca11g05283 1018 CDD STKc_IRAK 32 296 - -
Seca11g05283 1018 SUPERFAMILY Protein kinase-like (PK-like) 10 314 IPR011009 -
Seca11g05283 1018 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Seca11g05283 1018 SUPERFAMILY Concanavalin A-like lectins/glucanases 358 600 IPR013320 -
Seca11g05283 1018 CDD lectin_legume_LecRK_Arcelin_ConA 361 597 IPR001220 GO:0030246
Seca11g05283 1018 CDD STKc_IRAK 690 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05283 Seca-Chr11 149535681 149547076 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05283 348 971 Receptor kinase-like Gene Family AT5G10530 50.000 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca11g05283 Pkinase 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05283 - - gmx:100817743 1043.88