Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g05283 | ATGGGTGAGGATCTTGGAAGGGGAACAGGACCCAAGAAGTATTCATATGCAGAATTAGCAAATGCATCTAATAATTTCAAAGATGAGCATAAGCTAGGTCAGGGAGGATTTGGAAGTGTTTATAGGGGTTATCTTAAAGAAATAAAGTCTTATGTTGCTATTAAGAGGGTGTCAGAAGGTTCTGGTCAAGGGATTAAGGAGTTTGCATCTGAAGTAAGAATTATTAGCCGGTTAAGGCACCGAAATCTAGTGCAATTGCTTGGTTGGTGTCATGAAAGGAAAAAGCTTTTGCTTGTATATGAGTACATGCCAAATGGAAGCTTAGATGTTCATCTTTTCAAGAAACAAAGCTTGTTGAAATGGGCAGTTAGATATACAATAGCTCGAGGCTTGGCTTCAGCATTGCTATACTTGCATGAAGAATGGGAACAGTGTGTTGTACATAGAGACATAAAATCAAGCAACATAATGCTAGATGCAGAGTTTAATGCAAAACTTGGGGATTTTGGTTTAGCAAGGTTTGTTGATCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGGACTATGGGCTACATGGCACCTGAATGTGTTATTACTGGCAGGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATATGCCCGAAGGCCCAAGAAAATGAAATAAATATTGTGGAGTGGGTCTGGGATCTCTATGGAAAAGGGAAAATTCTTGAAGCAGCAGATCCAAGACTAGGTGGAGATTTTGAAGAGGAGAAAATAAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGATCATACTAATAGGCCTTCAATGAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCCCTACCCAATCTTCCGTCAAGTCTTCCTGTACCAACATATGCTGAGCGCCCACTGAACATATCCCTAACTTCATTCAGCACAAATGCTTCAGAGGAAGGCCAGACCCAGGGCCTTAATTTCCCCTATCATTTCTTGTTATCCATTTTCTTAGTACTCTTGATTATCCCATATGCATACTCTTTATCCTTTAACTTCACTAGCTTTAGTCCTAATGACAAGAACATTATATATGAGGGAGCGGCAAATCCTACAACATCAGGTATCCAACTTACTATAAACCAGCGAGGAAAGCTCATGAATGGAAGTATTGGTCGAGCCACATATTACGAACCTATCCAACTTTGGGACAAAACCACTAGGAATCTCACAGACTTCACAACCCATTTCACTTTCACCATAGATTCACGGAATCGAAATGTATATGGAGATGGGATTGCATTCTTTCTTGCCCCTGCAGGTTCAAAGATGCCTAATGCCACAAAAGGAGGTTCTTTTGGTCTGACATTGGATAATCAAAGATTGAACTCCACTGACAATCCATTTGTTGCTGTGGAGTTTGATATCTATCACAACATCTATGATCCGCCCAAGGAACATGCTGGAATAGACATCAACTCTGTGAGATCTATTGCTAATGTGACATGGTTAGCTGATATCAAGGAAGGGAAACTCAATGAGGCATGGATCAGTTACAATTCTAGTTCACAAAATTTAAGTATCATATTCACTGGTTTTAAAAATGCCACCTCCACCATCCTAAAGCAACATCTATCTGCCATAGTTGATCTGAGACTTTGTCTGCCTGAATTGGTTACTGTTGGCTTCTCAGCTGCCACAGGAAATGCAACTGCTATACATAGTATCCAATCATGGGATTTTAGCTCAACTTTGGAAGCACAACGAAACATAACAAACAAAGCTCCTAGTCAAAAGAAAAATTCCAAGATAGGACTGGAAGTGGGATTGAGTATTGGTGGATTTGTTTTAATTGGTGGATTGGGTTTAATCTCAATTGGGTTGTGGAAGAAGAGGAAGAAAGGAACTAAAGAGGAAGATCATGATTTTGAAGAGTACATGGGTGAGGATCTTGGAAGGGGGACAGGACCCCGGAAGTATTCATATGCAGAATTAGCAAATGCATCTAATAATTTCAAAGATGAGCATAAACTAGGTCAGGGAGGATTTGGAGGTGTTTATAGGGGTTATCTTAAAGACATAAAATCTTATGTTGCTATTAAGAGGGTGTCAGAAGGTTCTGGTCAAGGGATTAAGGAGTTTGCATCAGAAGTACGAATTATTAGCCGGTTAAGGCATCGAAATCTGGTGCAATTGATTGGTTGGTGTCATGAAAGAAAAAAACTCTTGCTTGTGTATGAGTACATGCCAAATGGAAGCTTAGATGTTCATCTTTTCAAGAAACAAAGCTTGTTGAAATGGGCAGTGAGATATACAATAGCTCGAGGCTTGGCTTCTGCATTGCTATACTTGCATGAAGAATGGGAACAGTGTGTTGTACATAGAGACATAAAATCAAGCAACATAATGCTAGATGCAGAGTTTAATGCAAAACTGGGAGATTTTGGTTTAGCAAGGTTTGTGGACCATGCAAAAGGTGCACAAACTACAGCTTTAGCAGGGACTATGGGCTACATGGCACCTGAATGTGTTATTACGGGCAGGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGGAGGAAACCCATAAGCCTTAAGGCCCAAGAAAATGAAATAAATATTGTGGAGTGGGTCTGGGGGCTTTATGGAAAGGGGAGAATTCTTGAAGCAGCAGATCCAAGACTAGGTGGAGATTTTGAAGAGGACCAAATCAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGATCATAAAAATAGGCCTTCAATAAGGCAAGCAATTCAAGTTCTTAACTTCGAAGCTCCCCTGCCCCATCTTCCATCAAGTGTACCTGTACCAACTTATGTTGACAGCCCACTGAACAAATCCGTAGCTTCATTCAGCATAAATGCTTCGAAGAAAGGCCAGAATCAGAACATAAACTTTAGTTCAAACACAAACTCCTCTGGGTTCACCACAACCTCTGATGATGTTTCTCCTTCTATATAG | 3057 | 0.405 | MGEDLGRGTGPKKYSYAELANASNNFKDEHKLGQGGFGSVYRGYLKEIKSYVAIKRVSEGSGQGIKEFASEVRIISRLRHRNLVQLLGWCHERKKLLLVYEYMPNGSLDVHLFKKQSLLKWAVRYTIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDAEFNAKLGDFGLARFVDHAKGAQTTALAGTMGYMAPECVITGRASKESDVYSFGVVALEIACGRKPICPKAQENEINIVEWVWDLYGKGKILEAADPRLGGDFEEEKIKCLMIVGLWCAHPDHTNRPSMRQAIQVLNFEAPLPNLPSSLPVPTYAERPLNISLTSFSTNASEEGQTQGLNFPYHFLLSIFLVLLIIPYAYSLSFNFTSFSPNDKNIIYEGAANPTTSGIQLTINQRGKLMNGSIGRATYYEPIQLWDKTTRNLTDFTTHFTFTIDSRNRNVYGDGIAFFLAPAGSKMPNATKGGSFGLTLDNQRLNSTDNPFVAVEFDIYHNIYDPPKEHAGIDINSVRSIANVTWLADIKEGKLNEAWISYNSSSQNLSIIFTGFKNATSTILKQHLSAIVDLRLCLPELVTVGFSAATGNATAIHSIQSWDFSSTLEAQRNITNKAPSQKKNSKIGLEVGLSIGGFVLIGGLGLISIGLWKKRKKGTKEEDHDFEEYMGEDLGRGTGPRKYSYAELANASNNFKDEHKLGQGGFGGVYRGYLKDIKSYVAIKRVSEGSGQGIKEFASEVRIISRLRHRNLVQLIGWCHERKKLLLVYEYMPNGSLDVHLFKKQSLLKWAVRYTIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDAEFNAKLGDFGLARFVDHAKGAQTTALAGTMGYMAPECVITGRASKESDVYSFGVVALEIACGRKPISLKAQENEINIVEWVWGLYGKGRILEAADPRLGGDFEEDQIKCLMIVGLWCAHPDHKNRPSIRQAIQVLNFEAPLPHLPSSVPVPTYVDSPLNKSVASFSINASKKGQNQNINFSSNTNSSGFTTTSDDVSPSI. | 1019 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g05283 | 1018 | Pfam | Protein kinase domain | 684 | 951 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g05283 | 1018 | Pfam | Protein kinase domain | 26 | 293 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g05283 | 1018 | FunFam | Lectin-domain containing receptor kinase A4.3 | 761 | 973 | - | - | |
Seca11g05283 | 1018 | Gene3D | - | 359 | 609 | - | - | |
Seca11g05283 | 1018 | MobiDBLite | consensus disorder prediction | 994 | 1018 | - | - | |
Seca11g05283 | 1018 | Gene3D | Phosphorylase Kinase; domain 1 | 669 | 760 | - | - | |
Seca11g05283 | 1018 | Gene3D | Phosphorylase Kinase; domain 1 | 11 | 102 | - | - | |
Seca11g05283 | 1018 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 359 | 606 | - | - | |
Seca11g05283 | 1018 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 804 | 816 | IPR008271 | GO:0004672|GO:0006468 | |
Seca11g05283 | 1018 | ProSiteProfiles | Protein kinase domain profile. | 26 | 304 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g05283 | 1018 | Pfam | Legume lectin domain | 360 | 604 | IPR001220 | GO:0030246 | |
Seca11g05283 | 1018 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 669 | 760 | - | - | |
Seca11g05283 | 1018 | SUPERFAMILY | Protein kinase-like (PK-like) | 668 | 975 | IPR011009 | - | |
Seca11g05283 | 1018 | FunFam | Lectin-domain containing receptor kinase A4.3 | 103 | 315 | - | - | |
Seca11g05283 | 1018 | PANTHER | - | 384 | 960 | - | - | |
Seca11g05283 | 1018 | Gene3D | Transferase(Phosphotransferase) domain 1 | 103 | 316 | - | - | |
Seca11g05283 | 1018 | Gene3D | Transferase(Phosphotransferase) domain 1 | 761 | 974 | - | - | |
Seca11g05283 | 1018 | ProSitePatterns | Protein kinases ATP-binding region signature. | 690 | 713 | IPR017441 | GO:0005524 | |
Seca11g05283 | 1018 | ProSiteProfiles | Protein kinase domain profile. | 684 | 962 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g05283 | 1018 | SMART | serkin_6 | 684 | 953 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g05283 | 1018 | SMART | serkin_6 | 26 | 295 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g05283 | 1018 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672|GO:0006468 | |
Seca11g05283 | 1018 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 11 | 102 | - | - | |
Seca11g05283 | 1018 | CDD | STKc_IRAK | 32 | 296 | - | - | |
Seca11g05283 | 1018 | SUPERFAMILY | Protein kinase-like (PK-like) | 10 | 314 | IPR011009 | - | |
Seca11g05283 | 1018 | ProSitePatterns | Protein kinases ATP-binding region signature. | 32 | 55 | IPR017441 | GO:0005524 | |
Seca11g05283 | 1018 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 358 | 600 | IPR013320 | - | |
Seca11g05283 | 1018 | CDD | lectin_legume_LecRK_Arcelin_ConA | 361 | 597 | IPR001220 | GO:0030246 | |
Seca11g05283 | 1018 | CDD | STKc_IRAK | 690 | 954 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g05283 | Seca-Chr11 | 149535681 | 149547076 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g05283 | 348 | 971 | Receptor kinase-like Gene Family | AT5G10530 | 50.000 | 0.0 | 591 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Seca11g05283 | Pkinase | 2.1e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g05283 | - | - | gmx:100817743 | 1043.88 |