Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05280 ATGAGAACCATTTTCATCCTCCAAATATTATGTCTTGCAAACTCACTATCATTCAATTACCCTTACTTTAAGAATGGTGATGTCAATTGGCAAGGTGATGCTTCTCCTTATAAAGGAACTATCCAAGTCACTTCCAACACCATGGACCAAAATAACAATTACAGTGTTGGGAGAGTCACAAGTTATGGTCACATGCACCTCTGGGATGTGAACTCTGGAAAGGTCACTGACTTCACTACCAAATTTTCCTTTCTTATTTTTTCAGATGAGAGTGATTATGGAGATGGAATGGCATTCTTCCTGGCAGATCCAAATCTACCACTTTTGAAGGATATTAAAGAAGGAGGTGGTCTTGGCCTTGTGGATGGAAACCAAGTGCTTAAGTCAACAAAACACTCATTTGTGGCAGTGGAGTTTGACACCTTCAATAATCCATCATGGGACCCTCCTAAACAAGGTACTCATGTAGGCTTGAATTTCAACTCTATGAGGTCTAACATAACTAAGCCATGGTTGACAGATATTCAAGAATGGAGAATTTACAATTGCAGCATTGAGTACAATTCAAGCACTCTTAATTTAAGTGTTTCATTCACTATGTACAGTGATGGTAAACCAGCTGAAGAATACATATCATACAAGGTTGACTTGAGAGATCATTTACCAGAGAGGGTTATTTTTGGCTTCTCTGCTGCAACAGGAAGATTGTATGAGGTTCACACTCTAAGGTCATGGTCATTCAGTTCAAGTCTAAAGAAGGAAAGGAAATTAATCCGCAAAAAATTGTGTATGGCAATAGGAATCAGTGCAGGTTTGTCTTTGAGTTTAATAGGACTGATTCTCATTTTATTATGGAAGATGAGAAAAGGCAAAGAAGAAGAAGAAACTTCAGAAACCACTTCTGATCTGAAGATGGATGATGAATTTCAAACGAGCATTGGACCTAAGAAGATTGGTTATTGTGAATTGGCAACTGCAACAAACAACTTTGAAGAGACACAGAAGCTTGGTCAAGGTGGTTTTGGTGGTGTTTACAAGGGTTATTTTAAAGACTCAAACTCCTTTGCTGCTATAAAGAAGATATCAGCAGATTCAAGACAGGGTATAAAGCAATATGCAGCAGAAGTGAAGATCATTAGCCAATTGAGGCATAGGAATTTGGTGAAACTCACTGGTTGGTGCCACAAGAAGAATGAATTCCTCCTGATATACGAATACATGCAAAATGGAAGTTTAGATTCTCATCTTTTTGGTGGAGAAAGTGTCTTGTCATGGCAGGTGAGGTACAAGATAGCTATAGGCTTGGCCTCAGCATTGCTTTATTTGCAGGAAGAGTGGGAAAAATGTGTGCTTCATAGGGACATCAAATCAAGCAACATAATGTTGGATTCCAATTTCAATGCTAAGCTTGGGGATTTTGGCCTTGCTAGGCTGGTGGATCATGAGAATGTGTCACAAACTACAGTTGTGGCTGGGACCATGGGTTACCTAGCTCCTGAATATATGAACACAGGAAAGGCTAGAAAGGAATCTGACATATTCAGTTTTGGGGTTGTTTTGTTGGAGGTAGCCAGTGGAAGAAAAGCCATTCACCACCATGACATGGAGGGTCAAGTATCATTAGTTGAGTGGGTGTGGGAGCTCTATGGATTGAGAAATCTCCTTGCAGCAGCAGATCCAAAGCTATGTGGGGTATTTGATGTGCAGCAAATGGAACGCTTGCTGGTTGTTGGCCTTTGGTGTGCTAATCCAGATAACAAATCTAGGCCCTCTATAAAGCAAGTGATTAAGGTGCTTAACTTTGAAGCTCCATTACCTATTCTCCCACAAAGGCTAAAAGCAGGAGGCATTGGCATTGGCCGTGTGGATAATAACCAAACACTTCTCCAAACAGGGTATCAATTTGTTGCAGTGGAGTTTGACACTTATGCAAATCAGTGGGACCCACGTGGTGAACATGTAGGTGTGAATATCAACTCTATGATCTCTGATATACTTGAGGAATGGTGGACAGATTTTTCTGTGTGGAAAGTTTATAACTGTGGTATTCAATACAATTCAACAGATAATCTTCTCAATGTTACTTTCACTGGATACAGAAATGAACTGTTGGTAACAAAATCCCTTTCATACTACATTGATTTGAGAGATTACTTACCAGATTATGTTATTGTTGGCATATCAGCTGCAACAGGTGATTCTTCTGAGGAACATGCCTTGTTGTCATGGTCATTTAGTCAAAGCCTAATAATTCCAAGTAATGCAGATCATAAGAAGAGGTCTAAATTGTTGGAGGGAATAGGAATTGGTGCAGGTTTTTCTGTGAGTTTAATTGGGTTGGTCTATGTTTTTTTATGGAAGATGAATAAAAGAAAAGTAGAAGAACTTGGTTCTGAAACCACTTCTGATTTGATCATGGATGATGAGTTCCAAATGAACACACCAAAGAAGATCAGCTATAAAGAATTGGTATCTGCAACAAACAACTTTGAAGAGAGGCAGAAGCTTGGTCAAGGTGCTTTTGGTTGTGTTTATAAAGGTTATTTGGAAGACTCAAACTCCTATGCTGCTATAAAGAGGATATCAGCAGATTCAACACAGGGTGTAAATGAATATGCAACAGAAGTGAAGATTATTAGCCAATTGAGGCATAAGAATTTGGTGAAACTCACTGGTTGGTGTCACAAGAAGAATGATCTTCACCTCATATATGAGTACATGTCAAATGGAAGCTTAGATTCTCTTCTTTTTAATGAAGAAAGCATCTTGTCTTGGCAGGTGAGGTACAATATAGCTCTTGGCTTGGCATCAGCATTGCTTTATTTGCAGGAAGAAGGGGAAAATTGTGTGCTTCATAGGGATATCAAATCAAGTAACATAATGTTGGATTCCAATTTCAATGCTAAGCTTGGGGATTTTGGCCTAGCTATGCTGGTGGATCATGAGAAAGGGTCACCAACCACAGTTATGGCTGGCACCATGGGTCAACTAGGCCCTCAATATATGAAAAATGGTAAGGCTAGAAAGGAATCTGACATATTCTGTTTTGGGGTTGTTTTGTTGGAGATAGCCAGTGGAAGAAAAGCCATTCACAAACAAGACAAGGAGGGTGAAGTATCATTAGTTGAGTGGGTGTGGGAGCTTTATGGATTGGGAAATCTCCTTGCAGCAGCAGACACAAAGCTTTGTGGGGTATTTGATGTGCAGCAAATGGAATGCTTACTTGTTGTTGGTCTTTGGTGTGTAAATCCAGATTGCAAATCTAGACCCTCTATAAGGAAAGTGATTAAGGTGCTTAACTTTGAAGCTCCTTTACCAATTCTCCCACAACAGATCCCTGTACCAGCCAATCTCCAACCAACAACAGATGAATTGTTTTTCAGTGTTTCATCTTTCTTATAG 3402 0.3956 MRTIFILQILCLANSLSFNYPYFKNGDVNWQGDASPYKGTIQVTSNTMDQNNNYSVGRVTSYGHMHLWDVNSGKVTDFTTKFSFLIFSDESDYGDGMAFFLADPNLPLLKDIKEGGGLGLVDGNQVLKSTKHSFVAVEFDTFNNPSWDPPKQGTHVGLNFNSMRSNITKPWLTDIQEWRIYNCSIEYNSSTLNLSVSFTMYSDGKPAEEYISYKVDLRDHLPERVIFGFSAATGRLYEVHTLRSWSFSSSLKKERKLIRKKLCMAIGISAGLSLSLIGLILILLWKMRKGKEEEETSETTSDLKMDDEFQTSIGPKKIGYCELATATNNFEETQKLGQGGFGGVYKGYFKDSNSFAAIKKISADSRQGIKQYAAEVKIISQLRHRNLVKLTGWCHKKNEFLLIYEYMQNGSLDSHLFGGESVLSWQVRYKIAIGLASALLYLQEEWEKCVLHRDIKSSNIMLDSNFNAKLGDFGLARLVDHENVSQTTVVAGTMGYLAPEYMNTGKARKESDIFSFGVVLLEVASGRKAIHHHDMEGQVSLVEWVWELYGLRNLLAAADPKLCGVFDVQQMERLLVVGLWCANPDNKSRPSIKQVIKVLNFEAPLPILPQRLKAGGIGIGRVDNNQTLLQTGYQFVAVEFDTYANQWDPRGEHVGVNINSMISDILEEWWTDFSVWKVYNCGIQYNSTDNLLNVTFTGYRNELLVTKSLSYYIDLRDYLPDYVIVGISAATGDSSEEHALLSWSFSQSLIIPSNADHKKRSKLLEGIGIGAGFSVSLIGLVYVFLWKMNKRKVEELGSETTSDLIMDDEFQMNTPKKISYKELVSATNNFEERQKLGQGAFGCVYKGYLEDSNSYAAIKRISADSTQGVNEYATEVKIISQLRHKNLVKLTGWCHKKNDLHLIYEYMSNGSLDSLLFNEESILSWQVRYNIALGLASALLYLQEEGENCVLHRDIKSSNIMLDSNFNAKLGDFGLAMLVDHEKGSPTTVMAGTMGQLGPQYMKNGKARKESDIFCFGVVLLEIASGRKAIHKQDKEGEVSLVEWVWELYGLGNLLAAADTKLCGVFDVQQMECLLVVGLWCVNPDCKSRPSIRKVIKVLNFEAPLPILPQQIPVPANLQPTTDELFFSVSSFL. 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05280 1133 FunFam L-type lectin-domain containing receptor kinase IX.1 14 259 - -
Seca11g05280 1133 ProSitePatterns Protein kinases ATP-binding region signature. 336 360 IPR017441 GO:0005524
Seca11g05280 1133 Gene3D - 603 751 - -
Seca11g05280 1133 FunFam L-type lectin-domain containing receptor kinase IX.1 315 406 - -
Seca11g05280 1133 ProSitePatterns Legume lectins beta-chain signature. 636 642 IPR019825 -
Seca11g05280 1133 CDD STKc_IRAK 336 600 - -
Seca11g05280 1133 ProSitePatterns Legume lectins alpha-chain signature. 221 230 IPR000985 -
Seca11g05280 1133 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 251 IPR013320 -
Seca11g05280 1133 PANTHER - 42 603 - -
Seca11g05280 1133 SMART serkin_6 830 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05280 1133 SMART serkin_6 330 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05280 1133 Gene3D Phosphorylase Kinase; domain 1 315 406 - -
Seca11g05280 1133 Gene3D Phosphorylase Kinase; domain 1 815 906 - -
Seca11g05280 1133 FunFam L-type lectin-domain containing receptor kinase IX.1 815 906 - -
Seca11g05280 1133 ProSitePatterns Protein kinases ATP-binding region signature. 836 859 IPR017441 GO:0005524
Seca11g05280 1133 ProSiteProfiles Protein kinase domain profile. 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05280 1133 Pfam Protein kinase domain 830 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05280 1133 Pfam Protein kinase domain 330 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05280 1133 SUPERFAMILY Concanavalin A-like lectins/glucanases 634 853 IPR013320 -
Seca11g05280 1133 SUPERFAMILY Protein kinase-like (PK-like) 815 1121 IPR011009 -
Seca11g05280 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Seca11g05280 1133 Gene3D - 13 297 - -
Seca11g05280 1133 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
Seca11g05280 1133 CDD lectin_legume_LecRK_Arcelin_ConA 16 251 IPR001220 GO:0030246
Seca11g05280 1133 SUPERFAMILY Protein kinase-like (PK-like) 307 601 IPR011009 -
Seca11g05280 1133 Pfam Legume lectin domain 609 757 IPR001220 GO:0030246
Seca11g05280 1133 Pfam Legume lectin domain 15 256 IPR001220 GO:0030246
Seca11g05280 1133 Gene3D Transferase(Phosphotransferase) domain 1 407 602 - -
Seca11g05280 1133 FunFam Lectin-domain containing receptor kinase A4.3 407 616 - -
Seca11g05280 1133 ProSiteProfiles Protein kinase domain profile. 830 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05280 1133 FunFam Lectin-domain containing receptor kinase A4.3 907 1119 - -
Seca11g05280 1133 Gene3D Transferase(Phosphotransferase) domain 1 907 1117 - -
Seca11g05280 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 950 962 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05280 Seca-Chr11 149493523 149519647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05280 4 612 Receptor kinase-like Gene Family AT5G10530 46.560 4.39e-174 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca11g05280 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05280 - - cam:101492002 721.079