Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05278 ATGGGCGAAGAACTTTCTGGTTTGGGTTTTAATGAGCTATGGCATCTTGAGAATCAACTGGAGATGAGTTTGAAGAGCGTTCGCACAAGAAAGAATCAAATTTTTAGTGAAGAGATCAAAGAATTACACAAAAAGGAAAGCCTTCGTGGTCAAGAAAATGAAGAACTTCATAAGAAGATAGACCGCATCCATAAGGAAAATGCAGAGCTACGCAAGGTTATTGAAGCAAAGCATACAGAAGAAGTAAATGCAAGATCCAATCTTTCATACAGTATCAGCGATGGATATGATGATATTAATATTGTTGAGCCAATCAGTCTGCAGCTAAGGCAGCCACAGCCTCATCAATACAATGAACCACCAGCCACAGCCAAAGCAATGAAATTGGGGTATTCCCTCAAACTGATGATATAA 414 0.3913 MGEELSGLGFNELWHLENQLEMSLKSVRTRKNQIFSEEIKELHKKESLRGQENEELHKKIDRIHKENAELRKVIEAKHTEEVNARSNLSYSISDGYDDINIVEPISLQLRQPQPHQYNEPPATAKAMKLGYSLKLMI. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05278 137 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca11g05278 137 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca11g05278 137 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05278 Seca-Chr11 149403833 149405656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05278 1 131 MADS-box Gene Family AT3G57230 43.182 4.51e-21 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05278 K09264 - gmx:100779119 142.51