Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g05219 | ATGGCTTCCCGGAACCAGAACAGGCCTCCTCGCAGCCCCTCCAACAGAAAGGTCGGTGCCGAAGAAGTCGCCACAGACAAGCGTCGGAGGGTTGGAGCTGAAAAGATGGAGCGACAGGGAGTGGCTGGGAGGACCAGAACGCCGTTTTCGGTTGTAAACAATGCAAATGCTGCAACTGACGCCGAAGGAACAGAGTGTAGCACCGTTGAGTTCACAAAAGAGGACGTAGAGGCATTGCTGAATGAGAAGATGAAAAAGGGGAATCCCTATGATAATAAGAAAAAGATGGAGCAGATGGGAGATCTAATTAAGCGGCTTAAGCTTTGTGTTCGATGGAAAGTGAGAGTTGAAGAAGGCCTTGTTCAAGAAAAAGAAAAGCTTCTATCTGAGCTAGAGTCTGCTGTGAAGAAGTGCAGTAATACTGAGACTGAGATAAGAAATAAGATTGAGGAATCGAATGAGATTATATCTGATTTGAGGAAGACAATATCTTCTTTAGAAGAGAGAATTATGAAGGAAGAATCAGATAAGTTGGAAGCGATTAATCGTTATAGAAAAGAAAAGGAAGCCCGAAGTGCAGCTGAGAAAGTTGTGGATGAAAAATCAGCTGAACTTGAAAAAGTACGGGATGAGAAATCAGCTGCTGAGCAGAAGGCCATTTCAAATGAGGACTTGTACAAACGATCACAAGAGTATAATATGAGCCTGCAGCAGTACAATAGTCGCCTTCAATCAGATCTTGAAACAGCTAATGAAGCACATAAACGACTTGAAACAGAGAAAGCAACCATTGTTGAGAGCCTTAGCAATGTAAGAGGTCACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAGGATGAGACTACAAAGCAGAAAGAAATATTAGCAAATGAACTCAAATGCCTCCGTGAAGAGTTAAAACAAATTAGAGATGATCGCGATCGCCAGCATGGACAAGTAAATGCTTTAATTGGAGAAGTTGCAAAATACAAAGAATGTACAGGGAAATCATTTGCACAATTGGATGCCTTGACAATTAAAGCAAATGCTCTTGAGGAAACTTGTTCTTCTCAAAAGGAGCAAATACATATACTGCAGCAGCAGCTGATTGCTGAAAAGGAAAAGTTAAAGATGGCTGATTTATCTGCGTCAGAAACAAGAACAATGTTTGAACAGCAGAATAGAATTATATGTGAACTACAAGATCGATTAGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAGAAGCTAAGGAAAAAACTGCACAACACTATCCTGGAGCTAAAAGGAAATATTCGTGTGTTTTGCCGTGTGCGACCTTTACTACCAGAGGATAGTGTGGGAACGGACATGGTTGTTTCCTACCCTATGTCAACAGAAATGCTTGGCCGGGGCATTGAATTGACACAAAGTGGGCAGAAGTACCAGTTTACATTTGACAAGGTGTTTAATGATGGGGCTTCTCAGCAGGATGTTTTCGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGCATAGAAGTGGAGTGGATTATATCATTATTGACATGGCTAACTGGAGGCTTATCTTTTCTTTCATATTTTCTCTTGGTTTTGTTCATGTAGTTTTGGGTATAAACTATGATCTGATAGAGGACCACGGTTTGTTATGGCAGGTTTGCATCTTTGCTTATGGGCAGACGGGTTCAGGCAAAACCTATACAATGATGGGAAGGCCTGATGCTCCAGATCTGAAAGGGTTGATACCACGTTCTTTAGAACAGATATTCCAGACCAGCCAGTCCTTGAAAGACCAGGGGTGGAAGTACAAAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGAGATTTGTTGTCACCAAATCGGTCAAGTAGGATTGACCAGACACGAACAGACAATAGTGCTCCCAGCAAACAGTACACTATTAAACATGATGCAAATGGAAACACACATGTAACGGACCTCACCATTGTGGATGTAGGTAGCGTGAATGAGATTTCCTCCCTCCTGCAACAGGCTGCGCAAAGCAGGTCAGTGGGAAGAACACAGATGAATGAACAGTCATCAAGAAGCCACTTTGTCTTTACTTTGCGTATATGTGGTATAAATGAGAACACTGAACAACAAGTGCAAGGTGTATTAAACCTGATTGATCTGGCTGGAAGTGAAAGACTGTCAAGGAGTGGAGCAACTGGGGACCGGTTGAAGGAAACTCAGGCAATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCACGTTCCTTTTAGGAATTCAAAACTAACATACCTTCTCCAGCCATGTCTTGGTGGGGATTCGAAAACGTTAATGTTTGTCAACGTGTCACCTGATCAATCTTCAATTGGTGAGTCACTTTGCTCTCTTCGTTTTGCGGCCAGAGTCAATGCCTGTGAAATTGGGATTCCCCGGCGTCAGACTCAGACATCCACACGGTCCTTAGATTCTCGGTTGAGCTATGGCTAA | 2538 | 0.4236 | MASRNQNRPPRSPSNRKVGAEEVATDKRRRVGAEKMERQGVAGRTRTPFSVVNNANAATDAEGTECSTVEFTKEDVEALLNEKMKKGNPYDNKKKMEQMGDLIKRLKLCVRWKVRVEEGLVQEKEKLLSELESAVKKCSNTETEIRNKIEESNEIISDLRKTISSLEERIMKEESDKLEAINRYRKEKEARSAAEKVVDEKSAELEKVRDEKSAAEQKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETANEAHKRLETEKATIVESLSNVRGHNKALQDQLVSLKVSQDETTKQKEILANELKCLREELKQIRDDRDRQHGQVNALIGEVAKYKECTGKSFAQLDALTIKANALEETCSSQKEQIHILQQQLIAEKEKLKMADLSASETRTMFEQQNRIICELQDRLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDSVGTDMVVSYPMSTEMLGRGIELTQSGQKYQFTFDKVFNDGASQQDVFVEISQLVQSALDGYKHRSGVDYIIIDMANWRLIFSFIFSLGFVHVVLGINYDLIEDHGLLWQVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYKMQASILEIYNETIRDLLSPNRSSRIDQTRTDNSAPSKQYTIKHDANGNTHVTDLTIVDVGSVNEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDQSSIGESLCSLRFAARVNACEIGIPRRQTQTSTRSLDSRLSYG. | 846 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g05219 | 845 | Coils | Coil | 117 | 218 | - | - | |
Seca11g05219 | 845 | Gene3D | Kinesin motor domain | 377 | 824 | IPR036961 | - | |
Seca11g05219 | 845 | Coils | Coil | 289 | 323 | - | - | |
Seca11g05219 | 845 | CDD | KISc_C_terminal | 433 | 824 | - | - | |
Seca11g05219 | 845 | Coils | Coil | 345 | 372 | - | - | |
Seca11g05219 | 845 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 395 | 512 | IPR027417 | - | |
Seca11g05219 | 845 | SMART | kinesin_4 | 433 | 830 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca11g05219 | 845 | ProSiteProfiles | Kinesin motor domain profile. | 435 | 822 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca11g05219 | 845 | MobiDBLite | consensus disorder prediction | 632 | 652 | - | - | |
Seca11g05219 | 845 | PRINTS | Kinesin heavy chain signature | 772 | 793 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca11g05219 | 845 | PRINTS | Kinesin heavy chain signature | 723 | 741 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca11g05219 | 845 | PRINTS | Kinesin heavy chain signature | 557 | 578 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca11g05219 | 845 | PRINTS | Kinesin heavy chain signature | 692 | 709 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca11g05219 | 845 | Coils | Coil | 240 | 260 | - | - | |
Seca11g05219 | 845 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 559 | 838 | IPR027640 | GO:0003777|GO:0007018 | |
Seca11g05219 | 845 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Seca11g05219 | 845 | ProSitePatterns | Kinesin motor domain signature. | 722 | 733 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Seca11g05219 | 845 | Pfam | Microtubule binding | 417 | 512 | IPR031852 | GO:0008017 | |
Seca11g05219 | 845 | Pfam | Kinesin motor domain | 559 | 820 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Seca11g05219 | 845 | MobiDBLite | consensus disorder prediction | 20 | 41 | - | - | |
Seca11g05219 | 845 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 548 | 839 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g05219 | Seca-Chr11 | 148269365 | 148275971 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g05219 | 344 | 819 | Calmodulin-binding Proteins | AT5G65930 | 34.232 | 2.50e-73 | 260 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g05219 | K10405 | - | gmx:100780319 | 1189.87 |