Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05219 ATGGCTTCCCGGAACCAGAACAGGCCTCCTCGCAGCCCCTCCAACAGAAAGGTCGGTGCCGAAGAAGTCGCCACAGACAAGCGTCGGAGGGTTGGAGCTGAAAAGATGGAGCGACAGGGAGTGGCTGGGAGGACCAGAACGCCGTTTTCGGTTGTAAACAATGCAAATGCTGCAACTGACGCCGAAGGAACAGAGTGTAGCACCGTTGAGTTCACAAAAGAGGACGTAGAGGCATTGCTGAATGAGAAGATGAAAAAGGGGAATCCCTATGATAATAAGAAAAAGATGGAGCAGATGGGAGATCTAATTAAGCGGCTTAAGCTTTGTGTTCGATGGAAAGTGAGAGTTGAAGAAGGCCTTGTTCAAGAAAAAGAAAAGCTTCTATCTGAGCTAGAGTCTGCTGTGAAGAAGTGCAGTAATACTGAGACTGAGATAAGAAATAAGATTGAGGAATCGAATGAGATTATATCTGATTTGAGGAAGACAATATCTTCTTTAGAAGAGAGAATTATGAAGGAAGAATCAGATAAGTTGGAAGCGATTAATCGTTATAGAAAAGAAAAGGAAGCCCGAAGTGCAGCTGAGAAAGTTGTGGATGAAAAATCAGCTGAACTTGAAAAAGTACGGGATGAGAAATCAGCTGCTGAGCAGAAGGCCATTTCAAATGAGGACTTGTACAAACGATCACAAGAGTATAATATGAGCCTGCAGCAGTACAATAGTCGCCTTCAATCAGATCTTGAAACAGCTAATGAAGCACATAAACGACTTGAAACAGAGAAAGCAACCATTGTTGAGAGCCTTAGCAATGTAAGAGGTCACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAGGATGAGACTACAAAGCAGAAAGAAATATTAGCAAATGAACTCAAATGCCTCCGTGAAGAGTTAAAACAAATTAGAGATGATCGCGATCGCCAGCATGGACAAGTAAATGCTTTAATTGGAGAAGTTGCAAAATACAAAGAATGTACAGGGAAATCATTTGCACAATTGGATGCCTTGACAATTAAAGCAAATGCTCTTGAGGAAACTTGTTCTTCTCAAAAGGAGCAAATACATATACTGCAGCAGCAGCTGATTGCTGAAAAGGAAAAGTTAAAGATGGCTGATTTATCTGCGTCAGAAACAAGAACAATGTTTGAACAGCAGAATAGAATTATATGTGAACTACAAGATCGATTAGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAGAAGCTAAGGAAAAAACTGCACAACACTATCCTGGAGCTAAAAGGAAATATTCGTGTGTTTTGCCGTGTGCGACCTTTACTACCAGAGGATAGTGTGGGAACGGACATGGTTGTTTCCTACCCTATGTCAACAGAAATGCTTGGCCGGGGCATTGAATTGACACAAAGTGGGCAGAAGTACCAGTTTACATTTGACAAGGTGTTTAATGATGGGGCTTCTCAGCAGGATGTTTTCGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGCATAGAAGTGGAGTGGATTATATCATTATTGACATGGCTAACTGGAGGCTTATCTTTTCTTTCATATTTTCTCTTGGTTTTGTTCATGTAGTTTTGGGTATAAACTATGATCTGATAGAGGACCACGGTTTGTTATGGCAGGTTTGCATCTTTGCTTATGGGCAGACGGGTTCAGGCAAAACCTATACAATGATGGGAAGGCCTGATGCTCCAGATCTGAAAGGGTTGATACCACGTTCTTTAGAACAGATATTCCAGACCAGCCAGTCCTTGAAAGACCAGGGGTGGAAGTACAAAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGAGATTTGTTGTCACCAAATCGGTCAAGTAGGATTGACCAGACACGAACAGACAATAGTGCTCCCAGCAAACAGTACACTATTAAACATGATGCAAATGGAAACACACATGTAACGGACCTCACCATTGTGGATGTAGGTAGCGTGAATGAGATTTCCTCCCTCCTGCAACAGGCTGCGCAAAGCAGGTCAGTGGGAAGAACACAGATGAATGAACAGTCATCAAGAAGCCACTTTGTCTTTACTTTGCGTATATGTGGTATAAATGAGAACACTGAACAACAAGTGCAAGGTGTATTAAACCTGATTGATCTGGCTGGAAGTGAAAGACTGTCAAGGAGTGGAGCAACTGGGGACCGGTTGAAGGAAACTCAGGCAATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCTTTGGCAAAGAAAGAGGAGCACGTTCCTTTTAGGAATTCAAAACTAACATACCTTCTCCAGCCATGTCTTGGTGGGGATTCGAAAACGTTAATGTTTGTCAACGTGTCACCTGATCAATCTTCAATTGGTGAGTCACTTTGCTCTCTTCGTTTTGCGGCCAGAGTCAATGCCTGTGAAATTGGGATTCCCCGGCGTCAGACTCAGACATCCACACGGTCCTTAGATTCTCGGTTGAGCTATGGCTAA 2538 0.4236 MASRNQNRPPRSPSNRKVGAEEVATDKRRRVGAEKMERQGVAGRTRTPFSVVNNANAATDAEGTECSTVEFTKEDVEALLNEKMKKGNPYDNKKKMEQMGDLIKRLKLCVRWKVRVEEGLVQEKEKLLSELESAVKKCSNTETEIRNKIEESNEIISDLRKTISSLEERIMKEESDKLEAINRYRKEKEARSAAEKVVDEKSAELEKVRDEKSAAEQKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETANEAHKRLETEKATIVESLSNVRGHNKALQDQLVSLKVSQDETTKQKEILANELKCLREELKQIRDDRDRQHGQVNALIGEVAKYKECTGKSFAQLDALTIKANALEETCSSQKEQIHILQQQLIAEKEKLKMADLSASETRTMFEQQNRIICELQDRLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDSVGTDMVVSYPMSTEMLGRGIELTQSGQKYQFTFDKVFNDGASQQDVFVEISQLVQSALDGYKHRSGVDYIIIDMANWRLIFSFIFSLGFVHVVLGINYDLIEDHGLLWQVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYKMQASILEIYNETIRDLLSPNRSSRIDQTRTDNSAPSKQYTIKHDANGNTHVTDLTIVDVGSVNEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDQSSIGESLCSLRFAARVNACEIGIPRRQTQTSTRSLDSRLSYG. 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05219 845 Coils Coil 117 218 - -
Seca11g05219 845 Gene3D Kinesin motor domain 377 824 IPR036961 -
Seca11g05219 845 Coils Coil 289 323 - -
Seca11g05219 845 CDD KISc_C_terminal 433 824 - -
Seca11g05219 845 Coils Coil 345 372 - -
Seca11g05219 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 512 IPR027417 -
Seca11g05219 845 SMART kinesin_4 433 830 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g05219 845 ProSiteProfiles Kinesin motor domain profile. 435 822 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g05219 845 MobiDBLite consensus disorder prediction 632 652 - -
Seca11g05219 845 PRINTS Kinesin heavy chain signature 772 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g05219 845 PRINTS Kinesin heavy chain signature 723 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g05219 845 PRINTS Kinesin heavy chain signature 557 578 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g05219 845 PRINTS Kinesin heavy chain signature 692 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g05219 845 Coils Coil 240 260 - -
Seca11g05219 845 PANTHER KINESIN-LIKE PROTEIN KLP-3 559 838 IPR027640 GO:0003777|GO:0007018
Seca11g05219 845 MobiDBLite consensus disorder prediction 1 48 - -
Seca11g05219 845 ProSitePatterns Kinesin motor domain signature. 722 733 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca11g05219 845 Pfam Microtubule binding 417 512 IPR031852 GO:0008017
Seca11g05219 845 Pfam Kinesin motor domain 559 820 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g05219 845 MobiDBLite consensus disorder prediction 20 41 - -
Seca11g05219 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 548 839 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05219 Seca-Chr11 148269365 148275971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05219 344 819 Calmodulin-binding Proteins AT5G65930 34.232 2.50e-73 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05219 K10405 - gmx:100780319 1189.87