Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05207 ATGGTTAACATAGGTGAGGAGCCATGTATTAATTTAGATGATGACAGAGATGATAATGATAGTTATGGTGTTAGCATTGATGAAAGTGTTCATGGAGAGGACAGTGGTGTAGGGGGTCAAAATGAGCAGGGAGAACTGGTTTCACCAGATGAAAAAGTTAGACAGCTATTAGACCTTACAGGTGATGATATACGAATGCTTGAATTTGGTAGTGAACATGAGGCATGTATATTTTATGAGACATATGCTAAGTCTATTGGGTTTTCTGTGAGGAAAGATGATGTAACTAGAGATTCTAAAGGTCAGGTGGTAATGCGACAAATCGTATGCAACAGAGAGGGTTTGAGGAATAAAAAGCACTTCAGGAGGGTTGACAGAAAAAGACCCCATAAACCAATAACTCGCACAAAGTGTCCAGCTAAGTTGAGGGTGCATTATGATTTCAAGAATTCAAAATGGAAAGTGGTTTCTTTTGTGGAGACCCATAATCACGATCTAACCCCAGCAATGTATAGGCACCTAATGCCTACATACCGTGTTATTTCTGATGCGGACAAAGCTCAGGTGGATAGCTTGCACTCAAGTGGGGTTAAGACATGTCATATAATGGGATATATGTTGTCACAAAATGAGGGATATGGTAAACTTGGTTTTTGTAAGAAGGATTTGTATAATTATATAGATCGCATAAAGCGCCTTAAGATTAAGAGTGGAGATGCACGGGCTGCATTGAGCTATCTACAAGGCAAGGCAGATAATGACCCAATGCTATATTCGAGTTTTGAAACTACTGATGATGGTAAATTAAGCACCTATTTTGGGCAGATGGATGCAGCATAG 840 0.3952 MVNIGEEPCINLDDDRDDNDSYGVSIDESVHGEDSGVGGQNEQGELVSPDEKVRQLLDLTGDDIRMLEFGSEHEACIFYETYAKSIGFSVRKDDVTRDSKGQVVMRQIVCNREGLRNKKHFRRVDRKRPHKPITRTKCPAKLRVHYDFKNSKWKVVSFVETHNHDLTPAMYRHLMPTYRVISDADKAQVDSLHSSGVKTCHIMGYMLSQNEGYGKLGFCKKDLYNYIDRIKRLKIKSGDARAALSYLQGKADNDPMLYSSFETTDDGKLSTYFGQMDAA. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05207 279 PANTHER OS01G0519700 PROTEIN 67 273 - -
Seca11g05207 279 MobiDBLite consensus disorder prediction 1 48 - -
Seca11g05207 279 Pfam FAR1 DNA-binding domain 78 167 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05207 Seca-Chr11 147979593 147980432 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g05207 FAR1 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05207 - - ccaj:109792835 297.745