Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05201 ATGAAAAAATCAAATGGGGTCTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAGATACTATTGGCAGTAGAATACCTACATTCAAATTTTGTTTTACACCGTGACCTAAAGTGTTCTAACATCTTTCTCACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGGCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTGTTAA 210 0.3905 MKKSNGVYFPEEKLCKWFTQILLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAC. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05201 69 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 68 - -
Seca11g05201 69 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05201 69 SUPERFAMILY Protein kinase-like (PK-like) 4 65 IPR011009 -
Seca11g05201 69 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
Seca11g05201 69 Gene3D Transferase(Phosphotransferase) domain 1 1 68 - -
Seca11g05201 69 Pfam Protein kinase domain 7 65 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05201 Seca-Chr11 147762305 147763937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05201 15 67 MAP Kinase Gene Family AT4G01370 50.000 3.18e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Seca11g05201 Pkinase 3.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05201 K08857 - pvy:116138889 142.124