Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05181 ATGAAGATATTTTACGCTAAAGAGCTTCTGTGTCCATTTCTTCTGCTGTTGTTCCTTTCCCCTTCATTCCAATCACTTGACAGCATCACCCAAAACCATCCCCTGAAAGACGGCGACGTTTTGGTCTCCAAAGACAGGGGAACCTTTGCACTTGGTTTCTTCAGTCCGCGAGATTCTAGAAGACGATACGTTGGGATATGGTACAACAAAATTGCAGAGCAAACGGTTGTGTGGGTTGCAAACAGAGACACCCCTCTCAATGACACTTCCGGTGTTCTCTCCATCAACAAAGGAAACCTCGTACTCCACCGTGACAATAACCGAAATCTTAGTCCAATTTGGTTTTCAAATGTTTCTACCTTAACTGCCAACGCTTCAGCTAAGCTTTTAGACACAGGAAACTTGGTTTTGATCCAAAGTGGAAGGAACAGCAACGTTTTGTGGCAGAGTTTTGATTATCTCGGTAACACTTTGCTTCCTTTCATGAAGCTCGGGTTGGACCGGAAAACCGGTTTGGACCGGTTTCTTACGTCCTGGAAGTCCCCGATCGACCCAGGATCCGGGAACTTGACTTACCGGATCGACCCGACTGGGTTCCCGCAGCTGTTCCTGTACAAGAATCAAGCTCCCCTGTGGCGGGTCGGGTCATGGACGGGGCGGAGATGGAGCGGGGTACCTGAAATGACTCCGAATTTCATCTTCAATATTAGCTTTATCGACAATGCAGATGAAGTTTCCATAATGTATGGAGTGACGGACCCCATGGTGTTGTCGAGAATGGTGTTAGAAGAAACGGGTCACGTGAGAAGGTTAACGTGGCAACCTCATGAGGAGAGGTGGTTCCAAATCTGGTTTGCTCCGAAAGAGGAGTGCGACAACTTCAGACAATGCGGATTGAACGCGAACTGCGACCCGTATAAAGAAGACAAGTTTGAGTGCGAGTGTTTACCTGGGTTCGAACCCAAGTCTGAGAGAGAATGGTTTCTTAGAGATGGGTCGGGTGGGTGCGTTAGGAAGCGAAGCGTATCCACGTGTGGAAGTGGGGAGGGGTTTGTGAAGGTGGCACGTGTGAAGGTACCAGACACTTCGGAGGCACGTGTTGATGAGAGGCTAGACATGAGAGGGTGTAAGGAGAAATGTTTGAGGGATTGTTCTTGTGCAGCTTATACAAGTGCCAATGAGAGCTCTCAGAGTGGGTGTGTTACTTGGCATGGAGACATGGAAGATACAAGAACATACGCACAGGTGGGACAAGATTTGTATGTACGCGTCGATGCACTTGAATTAGGTACTCTCCTTTCTTACTCTTTAATTGAGAAATTAAAATTCTTATATCAATACATTAAAGTATTAAGAATTTTGTACGTCACCTCCATAGCTGCCGCAACAGACAATTTCTCTACAGATAACAAGCTTGGTCAAGGTGGTTTTGGTTCTGTTTATAAGGGTGTCCTGAGTAATGGAATGGAAATAGCAGTGAAGAGATTGTCAAAGTATTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGATTGTTTTGATTTCAAAGCTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGTTGCATTCAGGGAGAGGAGAAGATGTTAATCTATGAGTATTTGCCAAACAAAAGCTTAGACTCTTTCATTTTTGATGAGTCTAAAAGGTCAGAGTTAGACTGGGAAAAAAGATTTGATATCATCTGTGGGGTTGCTAGAGGGATCTTATACCTTCATCAAGATTCACGATTAAGAATCATTCATAGAGACTTAAAGGCCAGCAATGTCTTGCTAGACTCTGCATTGAACCCAAAAATTGCAGATTTTGGCATGGCTAGGATATTTGGTGGAGATCAAATTGAAGCAGACACAAATCGAGTTGTTGGAACCTATGGCTACATGTCACCAGAATATGCCATGAAAGGACATTTTTCAATAAAGTCTGATGTATACAGCTTCGGAGTTTTACTTTTAGAGATTGTTACTGGTAGAAAGAATAGCATTGAATATGAGGACATTACATCCACAAGTTTAGTTGGACATGTATGGGATCTATGGAGAGAAGATAAAGCTATGGAGATTATTGATCAAACATTAAGGGAGTCATGCTCTGACTACGAAGTCCAAAGATGCATCCAAATTGGGCTTTTATGTGTACAAGATTATGCTGTAGACAGACCTTCTATGTCAACAGTTGTTTCCATGTTGGGTAATGACTCAACTCTTCCTATTCCAAAACAACCAGCATTTATTTTCAAGAGAACTAATTGTGATAGTTCAACCAGTGAAGGAATTTATTCAGTGAATGAGGTAAGTATGACTATGATTGAAGCACGCTAG 2343 0.4302 MKIFYAKELLCPFLLLLFLSPSFQSLDSITQNHPLKDGDVLVSKDRGTFALGFFSPRDSRRRYVGIWYNKIAEQTVVWVANRDTPLNDTSGVLSINKGNLVLHRDNNRNLSPIWFSNVSTLTANASAKLLDTGNLVLIQSGRNSNVLWQSFDYLGNTLLPFMKLGLDRKTGLDRFLTSWKSPIDPGSGNLTYRIDPTGFPQLFLYKNQAPLWRVGSWTGRRWSGVPEMTPNFIFNISFIDNADEVSIMYGVTDPMVLSRMVLEETGHVRRLTWQPHEERWFQIWFAPKEECDNFRQCGLNANCDPYKEDKFECECLPGFEPKSEREWFLRDGSGGCVRKRSVSTCGSGEGFVKVARVKVPDTSEARVDERLDMRGCKEKCLRDCSCAAYTSANESSQSGCVTWHGDMEDTRTYAQVGQDLYVRVDALELGTLLSYSLIEKLKFLYQYIKVLRILYVTSIAAATDNFSTDNKLGQGGFGSVYKGVLSNGMEIAVKRLSKYSGQGIEEFKNEIVLISKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDSFIFDESKRSELDWEKRFDIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSALNPKIADFGMARIFGGDQIEADTNRVVGTYGYMSPEYAMKGHFSIKSDVYSFGVLLLEIVTGRKNSIEYEDITSTSLVGHVWDLWREDKAMEIIDQTLRESCSDYEVQRCIQIGLLCVQDYAVDRPSMSTVVSMLGNDSTLPIPKQPAFIFKRTNCDSSTSEGIYSVNEVSMTMIEAR. 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05181 780 PIRSF SRK 436 780 IPR024171 GO:0004674
Seca11g05181 780 PIRSF SRK 1 445 IPR024171 GO:0004674
Seca11g05181 780 ProSiteProfiles Protein kinase domain profile. 466 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05181 780 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Seca11g05181 780 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Seca11g05181 780 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Seca11g05181 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 185 IPR036426 -
Seca11g05181 780 ProSiteProfiles Bulb-type lectin domain profile. 26 150 IPR001480 -
Seca11g05181 780 CDD EGF_CA 290 323 - -
Seca11g05181 780 Pfam PAN-like domain 345 409 IPR003609 -
Seca11g05181 780 SMART ntp_6 346 424 IPR003609 -
Seca11g05181 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Seca11g05181 780 Gene3D Transferase(Phosphotransferase) domain 1 542 744 - -
Seca11g05181 780 Pfam D-mannose binding lectin 75 180 IPR001480 -
Seca11g05181 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 542 744 - -
Seca11g05181 780 Pfam Protein tyrosine and serine/threonine kinase 468 737 IPR001245 GO:0004672|GO:0006468
Seca11g05181 780 Gene3D - 23 151 IPR036426 -
Seca11g05181 780 CDD PAN_AP_plant 343 424 - -
Seca11g05181 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 151 - -
Seca11g05181 780 SUPERFAMILY Protein kinase-like (PK-like) 450 754 IPR011009 -
Seca11g05181 780 Pfam Domain of unknown function (DUF3403) 739 780 IPR021820 GO:0004674
Seca11g05181 780 CDD STKc_IRAK 472 737 - -
Seca11g05181 780 SMART blect_4 32 154 IPR001480 -
Seca11g05181 780 Gene3D Phosphorylase Kinase; domain 1 438 541 - -
Seca11g05181 780 CDD B_lectin 32 153 IPR001480 -
Seca11g05181 780 SMART serkin_6 466 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05181 780 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 729 - -
Seca11g05181 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 438 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05181 Seca-Chr11 147167858 147172476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05181 458 780 Receptor kinase-like Gene Family AT4G11530 58.859 3.67e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca11g05181 PK_Tyr_Ser-Thr 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05181 - - gmx:100812814 1229.93