Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05171 ATGGGCATTATTAACTTCAAAGAATTGACTCCGAATGAGGCAATGAGATATCACTTTCAAGATCTTGAAGTTTCCTTTGATTTCTACAACTTCTATGCACGATTGAATGGATTTTCGGCTCACAAAGATAGGACTGTGCATAACAAGAATTTGGAAGTAATTCAACAAACATTTGTCTGCTATAGGGAAGGGAATAGAATAGAACACTTTAAAAATGGGAAAAAATGGAAACGTCAACCGAGGAAAAAACAAGGTGTGAGTGTCAAGCCAAATGTGTAG 279 0.362 MGIINFKELTPNEAMRYHFQDLEVSFDFYNFYARLNGFSAHKDRTVHNKNLEVIQQTFVCYREGNRIEHFKNGKKWKRQPRKKQGVSVKPNV. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05171 92 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 83 - -
Seca11g05171 92 MobiDBLite consensus disorder prediction 71 92 - -
Seca11g05171 92 Pfam FAR1 DNA-binding domain 27 85 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05171 Seca-Chr11 147074359 147074637 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g05171 FAR1 2.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05171 - - tpra:123915148 97.8265