Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05164 ATGAGAGGCTTCACTACCCTCCTCTCTTTCTTCCTTTTTTGCTTCTCCACTTTACTCACTTTTTTCTCCACACCTTCAACCTCTTCCGATACCTTAACAGCAACCCAATTCCTCAGAATCAACCAAACCCTCTCATCCCCAAAAGGAATTTTCGAGCTGGGTTTCTTTCCTCCCACCAATTCCATTTCCACCTGGTACTTGGGCATATGGTACAAAACCATTGATGATAAAACAGTGGTTTGGGTCGCAAACAGAGACACCCCACTTCAGAATTTCACTGGGTTTCTCAAGATAACCGAAAGTGGAAACCTCGTTCTTATCGACCAATCCGAGAAACCCGTGTGGTCCTCCAATCAAACCAAAACAGCTACCGACCCAGTTCTTCAGCTTTTGGATTCTGGCAATTTGGTTCTGAGAGAAGCAAACCAGAATGACCCCACAAAGTTTCTGTGGCAGAGCTTTGATTACCCAACAGATACCTTGTTACCTGGGATGAAGCTTGGTTGGAACTTCGACACAGGCATGGAGAGGCACATAAACTCATGGAAAATCACAGATCAAGACCCTTCAAGCGGTGACATTTCTTTCAAGCTAGATTACCGTGGCCTCCCAGAAATCTTCCTGTGGAGAAAAGACAAGAGAATATACAGAAGTGGACCTTGGAATGGTAAAAGATTCAGTGGGGTACCAGAGATGCAACCTGTTACAGATTCTATTAAATTCATGTTCTTTGTAGATGAGCATGAGGCGTATTATACATTCTCAATTGGGAATGAATCCTTGTTTTCAAGGCTCTCTGTGAATTCAATTGGGGAACTTCAACGCTTTACATGGATACAAAGCAGACAAGTTTGGAACAAATTTTGGTATGCACCTAAAGACCAATGTGATAATTACAGAGAGTGTGGTCCATTTGGTATTTGTGATACAAATGCTTCACCGGTTTGTCAGTGTGTGAAGGGGTTTCGCCCTAAGAACCAGCAGGCTTGGAATTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACAGAATTGGGGTGTGGGAGTGACAAGTTTTTGCTTATGCAGAATGTGAAGTTGCCAGAGACAACCAGAGTGTTTGTGAACAGGAGCATGGACCTTGTGGAGTGTAGAGATTTGTGCCACAGGAATTGTTCCTGCACTGGTTATGCCAACATTGAGATTATCAATGGAGGAAGTGGTTGTGTGATGTGGGTTGGTGAGCTTATAGACTTGAGGCAGTACCCTGCAGGAGGACAAGATCTCTATGTCAGATTGGCAGCTTCTGATGTAGATGACATAGGATTTGGAGGTGATTCTCACAAGACAAATACAGCTAAGACTGTAGGCATTATCATTGGTGGTGCAGCTTTGATACTTTTGGCATTAGGTCTCTTTTTCTTATGGAAGAAGAGGAAGTTGCAATGTATATTGAAAAGGAAGACTGAACACAGAGGTTCTTTAGAAAGAAGTCAAGATTTGCTAATGAGTGAGGTGGTGTTCTCAAGTAAAAGAGAACAGTCAGGTGAAAGGAACATGGATGACCTAGAGTTGCCATTGTTTGATTTTAATACCATAACAATGGCTACAAACAACTTCTCTGAAGCAAATAAACTTGGACAAGGGGGCTTTGGTAGTGTTTACAAAGGCAGGTTGATAGAAGGTCAGGAAATTGCTGTGAAGAGATTGTCAAAAACTTCTGGGCAAGGTGTTGAAGAATTTAAGAATGAGGTCAAGTTAATTGTCAAGCTTCAACATCGAAATCTTGTTCGGCTGCTTGGTTGCAGCATTCAGATGGATGAGAAGATGCTAGTGTATGAGTACATGGAAAACAGAAGCCTTGATGCTATTTTGTTTGACAAAGTAAAAAGATCCTCACTGAACTGGCAAAGGCGCTTCAACATTATATGTGGAATAGCTAGAGGGCTTCTTTATCTACACCAAGATTCCAGATTTAGGATCATCCATAGGGATCTCAAGGCAAGCAACATTTTACTTGACAAAGAGATGAACCCAAAAATATCAGATTTTGGGATGGCTAGAATTTTTGGTGCGGATCAGACAGAAGCAAATACAATGAGAGTTGTTGGAACATATGGTTATATGGCCCCTGAATATGCTATGGATGGGAATTTCTCAGTGAAATCTGATGTTTTTAGTTTCGGGGTTCTTGTGCTGGAGATCATAAGTGGGAAAAAGAACAGAGGATTCTATTTTGCAAACAAAGAATTGAATCTTCTAGGACATGGGTGGAAGCTGTGGAGAGAAGGAAATGCATTGGAACTGATTGATTCATCCATTGACAAGTCATATTCACCATCTGAAGTTCTTAGATGCATACAAGTTGGGCTCTTATGTGTACAAGAGCGAGCAGAAGATAGGCCAACAATGTCTTCAGTGGTTTTGATGCTGAGTAGTGAAACTGCAACAATGCCTCAGCCAAAAAACCCAGGGTTTTGCCTAGGAAGGAATCAAATGGAAACTGATTCATCTTCAAGTAAACAAGATGAATCATTCACTGTGAACCAAGTCACTGTCACAATGCTAGATGCCAGTTTCTCATTTTGCTCTTGTTCTGATACCTTATTTGCTGACAAAGTCATAACAGATGGTGAGCTTCTTGTTTCTAAAGCTAAAACTTTTGCTCTTGGATTCTTCAGTCCAGGCAAGTCCACCTCCCGTTATGTTGGAATTTGGTACTACAATTTGGCAGAACAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCCATCAATGACACTTCTGGGGTTCTCTCAATCAACCCAGATGGAAATCTAGTGCTTCACCACAACTATAGCACCTTTCCCATTTGGTCTACCAATGTTTCAGCCACTCAATCAAACAGCACCAATGTTATAGCACAGCTCTCAGATATAGGAAACCTTGTTCTGATTCTAAACAACCCCAAAACTGTCATATGGCAAAGCTTTGATCATCCCACAGACACCTTGCTTCCATATCTAAAGATGGGGTTTGACAGAAGAACTAACCAGAGTTGGTTCCTCCAATCCTGGAAGACAGATGATGACCCAGGAATAGGTTCCTTCACATTGAAATTCAGTTCAAGTGGGAAACCTCAGATGTTTATGTACAACCAGAACCTTCCTTGGTGGAGAGGTGGACATTGGAATGGGGAATTATTTGTGGGTGTACCTAATATGAAACGTGATATGGCCACTTTTAATGTTTCTTTTGTGGAAGATGATGACTATGTAGCAGTCTCATATAACATGTTTGATAAGTCCATTATTCCCAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAAATATTCACTTGGGATAACCAAAAAGGTCAATGGAACCGTTACTGGTCAGAACCAACAAATCAATGTGATAACTATGGAAGCTGTGGATCAAACAGTAACTGTGACCCTTTGAACTTTGAGGACTTTAAGTGTACTTGTTTACCAGGTTTTGAACCAAAATTCCTACATGATTGGTATGAGAACAGAGATGGGTCAGGAGGGTGTGTGAGGAAAAAAGGTGCATCTGTTTGTGGGAATGGAGAAGGGTTTGTCAGAGTTGAAGGCTTGAAGGTACCTGATATATCTGTGGCAATTGTTAAAAGTGGTTTGAGTTTGGAAGAATGTGAGAAGGAATGCTTGAGAAACTGCTCTTGTACTGCTTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGGTGCTTGGCATGGCATGGCAATTTAATGGACACACAAAAACTAAGTGATCAAGGCCAAGATGTATTTGTACGTGTTGATGCAGTTGAACTAGGAGAATGCAGTCACATTGTTCAAAGAAGAATAATACCACTCAAATTTGTGAGTTGCTTGAAATCTTATCTCATGGCATTTGTAATTTCAGATAAAATGATGCAGCAGTTAAACAAAGATTCTCCTAGAGAAGAGAATGATGTTCAAAGTAACACACATCCAAATCTTCCCTTTTTCACCTTTAAAACTATAATGGCAGCCACAAGAAATTTTAGTCATGAGAATAAGCTTGGTCAAGGTGGATTTGGCTCTGTCTATAAGGGCTGCCTAGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAAAGATTCAGGTCAAGGGACAGAAGAGTTTAAAAATGAAGTTACATTACTAGTTAAACTCCAACACAGAAATCTTGTGAGGTTGCTCGGTTGCTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTATGAATACCTACCAAACAAAAGCTTGGACTTCTTTATATTTGATAGAAATCAAAGACCATCCTTGGATTGGAGCAAGCGTTTTGAAATTATTTTTGGTATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCACAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTTGGAACATATGGATATATGTCACCAGAGTATGCAATGGAAGGGAGATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTACTACTGGAGATAATTGCTGGCAAGAGGAACACAGATTGTGAAACAGGAAGAGCCTCCCCAAATTTAATTGGACATGTGTGGATGCTTTGGACAGAAGGAAGGGCCTTAGATATTGTTGATTCAACATTAGGCCAGTCCTATCCTCCTGCTCTAGTTCTGAGATGCATTCAAATTGGACTCTTATGTGTGCAAGAAAATGCTATCAATAGACCATCCATGTTAGAAGTTGTTTTCATGCTAGGCAATGAAGCACCTCTTTCCTCACCCGAAAAGCCTGCATTTTTATTTAATGTCAACCAAGATTTGCAAGAGTCATCAACTTCAGGAGGAGCATGTTCAATAAATGAAGTAACAACAACTACCATCAGTGCTCGCTAA 4959 0.4057 MRGFTTLLSFFLFCFSTLLTFFSTPSTSSDTLTATQFLRINQTLSSPKGIFELGFFPPTNSISTWYLGIWYKTIDDKTVVWVANRDTPLQNFTGFLKITESGNLVLIDQSEKPVWSSNQTKTATDPVLQLLDSGNLVLREANQNDPTKFLWQSFDYPTDTLLPGMKLGWNFDTGMERHINSWKITDQDPSSGDISFKLDYRGLPEIFLWRKDKRIYRSGPWNGKRFSGVPEMQPVTDSIKFMFFVDEHEAYYTFSIGNESLFSRLSVNSIGELQRFTWIQSRQVWNKFWYAPKDQCDNYRECGPFGICDTNASPVCQCVKGFRPKNQQAWNLRDGSDGCVRNTELGCGSDKFLLMQNVKLPETTRVFVNRSMDLVECRDLCHRNCSCTGYANIEIINGGSGCVMWVGELIDLRQYPAGGQDLYVRLAASDVDDIGFGGDSHKTNTAKTVGIIIGGAALILLALGLFFLWKKRKLQCILKRKTEHRGSLERSQDLLMSEVVFSSKREQSGERNMDDLELPLFDFNTITMATNNFSEANKLGQGGFGSVYKGRLIEGQEIAVKRLSKTSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDAILFDKVKRSSLNWQRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGADQTEANTMRVVGTYGYMAPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYFANKELNLLGHGWKLWREGNALELIDSSIDKSYSPSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATMPQPKNPGFCLGRNQMETDSSSSKQDESFTVNQVTVTMLDASFSFCSCSDTLFADKVITDGELLVSKAKTFALGFFSPGKSTSRYVGIWYYNLAEQTVVWVANRDSPINDTSGVLSINPDGNLVLHHNYSTFPIWSTNVSATQSNSTNVIAQLSDIGNLVLILNNPKTVIWQSFDHPTDTLLPYLKMGFDRRTNQSWFLQSWKTDDDPGIGSFTLKFSSSGKPQMFMYNQNLPWWRGGHWNGELFVGVPNMKRDMATFNVSFVEDDDYVAVSYNMFDKSIIPRIVVQQSGFFQIFTWDNQKGQWNRYWSEPTNQCDNYGSCGSNSNCDPLNFEDFKCTCLPGFEPKFLHDWYENRDGSGGCVRKKGASVCGNGEGFVRVEGLKVPDISVAIVKSGLSLEECEKECLRNCSCTAYAVADVRNGGSGCLAWHGNLMDTQKLSDQGQDVFVRVDAVELGECSHIVQRRIIPLKFVSCLKSYLMAFVISDKMMQQLNKDSPREENDVQSNTHPNLPFFTFKTIMAATRNFSHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKDSGQGTEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDRNQRPSLDWSKRFEIIFGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGKRNTDCETGRASPNLIGHVWMLWTEGRALDIVDSTLGQSYPPALVLRCIQIGLLCVQENAINRPSMLEVVFMLGNEAPLSSPEKPAFLFNVNQDLQESSTSGGACSINEVTTTTISAR. 1653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05164 1652 Gene3D - 855 985 IPR036426 -
Seca11g05164 1652 Gene3D - 24 154 IPR036426 -
Seca11g05164 1652 Gene3D Hepatocyte Growth Factor 1178 1268 - -
Seca11g05164 1652 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 795 - -
Seca11g05164 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1299 1411 - -
Seca11g05164 1652 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Seca11g05164 1652 CDD PAN_AP_plant 1181 1260 - -
Seca11g05164 1652 ProSiteProfiles Protein kinase domain profile. 1336 1621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05164 1652 SUPERFAMILY alpha-D-mannose-specific plant lectins 908 1018 IPR036426 -
Seca11g05164 1652 Pfam D-mannose binding lectin 78 183 IPR001480 -
Seca11g05164 1652 Pfam D-mannose binding lectin 907 1013 IPR001480 -
Seca11g05164 1652 Pfam Protein tyrosine and serine/threonine kinase 1338 1604 IPR001245 GO:0004672|GO:0006468
Seca11g05164 1652 Pfam Protein tyrosine and serine/threonine kinase 536 802 IPR001245 GO:0004672|GO:0006468
Seca11g05164 1652 Gene3D Phosphorylase Kinase; domain 1 507 608 - -
Seca11g05164 1652 CDD B_lectin 35 157 IPR001480 -
Seca11g05164 1652 Pfam Domain of unknown function (DUF3403) 806 851 IPR021820 GO:0004674
Seca11g05164 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1412 1615 - -
Seca11g05164 1652 CDD STKc_IRAK 539 804 - -
Seca11g05164 1652 ProSiteProfiles Bulb-type lectin domain profile. 859 984 IPR001480 -
Seca11g05164 1652 ProSiteProfiles PAN/Apple domain profile. 347 427 IPR003609 -
Seca11g05164 1652 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 223 IPR036426 -
Seca11g05164 1652 CDD B_lectin 865 987 IPR001480 -
Seca11g05164 1652 Pfam Receptor serine/threonine kinase 489 523 IPR022126 GO:0004674
Seca11g05164 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 498 608 - -
Seca11g05164 1652 SUPERFAMILY Protein kinase-like (PK-like) 516 804 IPR011009 -
Seca11g05164 1652 Gene3D Transferase(Phosphotransferase) domain 1 609 816 - -
Seca11g05164 1652 Gene3D Transferase(Phosphotransferase) domain 1 1412 1616 - -
Seca11g05164 1652 CDD STKc_IRAK 1342 1607 - -
Seca11g05164 1652 SMART blect_4 865 987 IPR001480 -
Seca11g05164 1652 SMART blect_4 35 157 IPR001480 -
Seca11g05164 1652 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Seca11g05164 1652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Seca11g05164 1652 SMART ntp_6 1181 1260 IPR003609 -
Seca11g05164 1652 SMART ntp_6 347 426 IPR003609 -
Seca11g05164 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 154 - -
Seca11g05164 1652 Gene3D Phosphorylase Kinase; domain 1 1295 1411 - -
Seca11g05164 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 609 812 - -
Seca11g05164 1652 Pfam PAN-like domain 1180 1246 IPR003609 -
Seca11g05164 1652 Pfam PAN-like domain 347 412 IPR003609 -
Seca11g05164 1652 SMART serkin_6 1336 1583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05164 1652 SMART serkin_6 533 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05164 1652 CDD PAN_AP_plant 343 427 - -
Seca11g05164 1652 ProSiteProfiles Protein kinase domain profile. 533 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05164 1652 ProSiteProfiles EGF-like domain profile. 1121 1159 IPR000742 -
Seca11g05164 1652 SUPERFAMILY Protein kinase-like (PK-like) 1317 1627 IPR011009 -
Seca11g05164 1652 ProSiteProfiles PAN/Apple domain profile. 1180 1261 IPR003609 -
Seca11g05164 1652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 855 984 - -
Seca11g05164 1652 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Seca11g05164 1652 Pfam S-locus glycoprotein domain 1045 1157 IPR000858 GO:0048544
Seca11g05164 1652 ProSitePatterns Protein kinases ATP-binding region signature. 1342 1364 IPR017441 GO:0005524
Seca11g05164 1652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1457 1469 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05164 Seca-Chr11 147023960 147041470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05164 521 847 Receptor kinase-like Gene Family AT4G11530 59.337 8.03e-130 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca11g05164 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05164 - - mtr:11411809 1941.39