Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05154 ATGGGCATGATCATCAGATTCAAAGATGCACTTTTTCTGTTCTCCTTCTCTGTCCTCTGTTTTCATACTCTGTTTTCTCATGCAGCCAACTCCATCACACAATCTGAGTCGATCAAAGATGGTGATGGTATCACTTTGATATCAGATGGTCTCAACTTTGAAATGGGTTTCTTCAGTTTAGATAACTCCTCTATTAGATACGTTGGGATTTGGTACTACAAGGTTCCAGGTTCAGCATACGTGTGGGTTGCAAACAGAGAAAAACCCATCATAGGCAGAGGAGGGGCTATCACAATAAAAAATGATGGCAATTTGGTTTTACTTGATGGAGAGAAGAATGAGGTGTGGTCAAGTAACTTGTCAAATCCTATGAACAATTCCCAAGCTATTCTTCATGATGATGGGAACCTTGTTCTTTCAGATAGAGACAATGGCAAAGAGGTGTGGCAGAGCTTTGAGGACCCAAGTGACACATTTCTGCCAGGTATGAAAGTGCCAGTGAGTGGTGGAATGAAGAAGAACCCTTCCTTCAGGTCATGGAAATCAGCAACTGATCCTTCACAGGGAAACTACACAATGAGGGTTGATTCTGAGGCAACACCACAGATAGTGATTTTGGAAGGAGAGAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGTAGAGTATTCACAGGTGTGTCAAATATGACAGGAAGCTATCTATATGGTTTTAGACTTAATGCTGATGATAATGGAGGAAGGTACTTTGTATTTGATGCATTGGATAGCACTGACAAGATAAGGTTTCAAATTAGTTGGGATGGATATGAAAGGCAATTCAGGTTGAATGAAGATAAAAAACAATGGAATATGATACAAAGTGAGCCTCATGATCAGTGTGAGCTTTATAATTTCTGTGGCAGTTTTGCAGTATGTGATGTGTCTAATTCACCTTTATGTAGTTGCATACAAGGGTTTGAACCAAGTCACTGGGATGAGTGGAATAGAGGGAATTGGTCAGTAGGGTGTAAGAGGATAACTCCACTTAAGGCTGAGAGAGGTAATAGTTCTGGGAATGTGGTTAGTGTTGGAGAAGATGGTTTCTTGGTGCAAAGGAATTTGAAGTTGCCTGATTTTGCTAGTTTGGTCAATGCTGCTGATTCTGATGACTGTGAGCGTAATTGCCTGCAGAATAATTCTTGTACTGCATATGCATATGTTCTTGGAATTGGATGCATGGTTTGGGACATGGAGTTAGTTGATGTTCAACACTATGCAAATTTTGGAAATACACTCAACATTCGTCTTGCTGATTCTGATTTAGGTGGTGGGGAGAAAAAGACCAAAATTTGGATAATATTAGGTATTGTGGTGGGGATGATCTGCCTTGGTGTCATTGTATGGCTGGTATGGAGGTTAAAGAGAAAGCACAAAGCTTCTTTTTGCAACAATATTCATAGCGATGTACAAGGAAAGCTTGTAGGGGGAGAAGAAATAGCTGTCAAGAGGCTTTCAAGACGGTCCAGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGATGCTAATAGCCAAATTACAACATAGAAACCTGGTTAGGCTATTAGGATGTTCAATTCAAGGGGAAGAAAAGTTACTGGTATATGAATACATGCCAAACAAAAGCTTGGACCGTTTTTTATTTGATCCAGTGAAGCAAACAAAATTAGACTGGACAAAACGTTGTGAAATCATTGAGGGCATTGCAAGAGGGTTACTTTATCTGCACAGGGATTCAAGACTTAGAATAATTCATAGAGATCTAAAAGCAAGCAACATTTTATTGGATGAAAACATGAACCCAAAAATTTCAGACTTTGGCATGGCTAGGATATTTGGGGGGAACCAGAATGAAGCTAATACCAACAGAGTGGTTGGTACATATGGCTATATGTCCCCAGAATATGCAATGGAAGGTCTATTTTCAGTCAAATCTGATGTCTATAGTTTTGGCATATTGCTACTAGAAATTGTGAGTGGCCGCAGGAACACTAGCTTTCGTGACTCAGACGACTCAAGTCTCATAGATTATGCCTGGCGTCTTTGGAGTGAAAAGAGAGAAATGGATTTTGTTGATTCTTCCATCCGTGATTCAAGTCCAAAGAGCAAAGCTTTGAGATGCATACACATAGGAATGCTATGCGTGCAAGATTCTGCAGCTCATAGACCAAACATGTCCTCTGTGGTGTTGATGCTGGAAAGCGAAGCAACTACTCTTCCCTTGCCTAAACAACCTTTGCTTACTTCCATGAGGAGATATGAAGAAACAGAATTTAATACCGAAGGCCTTGATGTGTCAAATGACTTGTCAGTTACTATGGTGACAGGGAGATAG 2349 0.404 MGMIIRFKDALFLFSFSVLCFHTLFSHAANSITQSESIKDGDGITLISDGLNFEMGFFSLDNSSIRYVGIWYYKVPGSAYVWVANREKPIIGRGGAITIKNDGNLVLLDGEKNEVWSSNLSNPMNNSQAILHDDGNLVLSDRDNGKEVWQSFEDPSDTFLPGMKVPVSGGMKKNPSFRSWKSATDPSQGNYTMRVDSEATPQIVILEGEKRRWRSGYWDGRVFTGVSNMTGSYLYGFRLNADDNGGRYFVFDALDSTDKIRFQISWDGYERQFRLNEDKKQWNMIQSEPHDQCELYNFCGSFAVCDVSNSPLCSCIQGFEPSHWDEWNRGNWSVGCKRITPLKAERGNSSGNVVSVGEDGFLVQRNLKLPDFASLVNAADSDDCERNCLQNNSCTAYAYVLGIGCMVWDMELVDVQHYANFGNTLNIRLADSDLGGGEKKTKIWIILGIVVGMICLGVIVWLVWRLKRKHKASFCNNIHSDVQGKLVGGEEIAVKRLSRRSSQGLEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEYMPNKSLDRFLFDPVKQTKLDWTKRCEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGMARIFGGNQNEANTNRVVGTYGYMSPEYAMEGLFSVKSDVYSFGILLLEIVSGRRNTSFRDSDDSSLIDYAWRLWSEKREMDFVDSSIRDSSPKSKALRCIHIGMLCVQDSAAHRPNMSSVVLMLESEATTLPLPKQPLLTSMRRYEETEFNTEGLDVSNDLSVTMVTGR. 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05154 782 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 186 IPR036426 -
Seca11g05154 782 ProSiteProfiles PAN/Apple domain profile. 356 430 IPR003609 -
Seca11g05154 782 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 728 - -
Seca11g05154 782 SUPERFAMILY Protein kinase-like (PK-like) 487 760 IPR011009 -
Seca11g05154 782 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Seca11g05154 782 FunFam Uncharacterized protein 476 542 - -
Seca11g05154 782 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Seca11g05154 782 Gene3D - 24 152 IPR036426 -
Seca11g05154 782 SMART ntp_6 356 429 IPR003609 -
Seca11g05154 782 SMART blect_4 29 155 IPR001480 -
Seca11g05154 782 PIRSF SRK 2 483 IPR024171 GO:0004674
Seca11g05154 782 PIRSF SRK 481 782 IPR024171 GO:0004674
Seca11g05154 782 Gene3D Transferase(Phosphotransferase) domain 1 543 745 - -
Seca11g05154 782 CDD STKc_IRAK 484 738 - -
Seca11g05154 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Seca11g05154 782 CDD PAN_AP_plant 358 430 - -
Seca11g05154 782 Pfam D-mannose binding lectin 80 181 IPR001480 -
Seca11g05154 782 ProSiteProfiles Protein kinase domain profile. 445 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05154 782 Gene3D Phosphorylase Kinase; domain 1 469 542 - -
Seca11g05154 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 152 - -
Seca11g05154 782 Pfam Protein tyrosine and serine/threonine kinase 490 735 IPR001245 GO:0004672|GO:0006468
Seca11g05154 782 CDD B_lectin 41 155 IPR001480 -
Seca11g05154 782 Pfam PAN-like domain 357 415 IPR003609 -
Seca11g05154 782 SMART serkin_6 445 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05154 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 543 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05154 Seca-Chr11 146942086 146947856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05154 483 750 Receptor kinase-like Gene Family AT4G23140 62.909 3.08e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca11g05154 PK_Tyr_Ser-Thr 4.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05154 - - cam:101504189 1110.13