Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05151 ATGTTTATGGGATATGTGGCCCATTTGGAATCTGCAACTCTCAGATTTCAGCAATATGCAGTTAAAAGACTTTCAAGAGCCTCTGGACAGGGAATGGAAGAATTTTTAAATGAAGTGGAGGTGATTTCAAAGCTTCAACACAGAAATCTAGTTAGATTTCTTGGCTGCTGCACTGAACAAGAAGAAAAGATCTTGGTCTATGAGTACATGCCAAACAAAAGTTTGGATTCTTATATCTTTGATACTTTTCTTTCTGATTTGAAGGCTTTTACCATATCTTACATGATTGGCTATATTTCTCCGGAATATGCAAAGCAAGGAATAGTTTATGAGCTATCTGATGTCTTCAGCTTTGGAGTTTTACTACAAGAGATTATTAGTGGGAGAAGATACACTAGCATTTCTGAGGATGCAGAATTTCTTACACTTAAAGGATTTCATTTACTGTATCTTAATGGAGAACACAAGACAGTGCATTGGGAGAAAGAAAGCCAGCAATCAAAAACAGAAAAATGGAAGACAGCACGTAAAGAGAGATACTGA 543 0.3628 MFMGYVAHLESATLRFQQYAVKRLSRASGQGMEEFLNEVEVISKLQHRNLVRFLGCCTEQEEKILVYEYMPNKSLDSYIFDTFLSDLKAFTISYMIGYISPEYAKQGIVYELSDVFSFGVLLQEIISGRRYTSISEDAEFLTLKGFHLLYLNGEHKTVHWEKESQQSKTEKWKTARKERY. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05151 180 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 96 145 - -
Seca11g05151 180 SUPERFAMILY Protein kinase-like (PK-like) 13 133 IPR011009 -
Seca11g05151 180 FunFam Uncharacterized protein 7 69 - -
Seca11g05151 180 Gene3D Transferase(Phosphotransferase) domain 1 90 179 - -
Seca11g05151 180 Pfam Protein tyrosine and serine/threonine kinase 15 81 IPR001245 GO:0004672|GO:0006468
Seca11g05151 180 Pfam Protein tyrosine and serine/threonine kinase 95 132 IPR001245 GO:0004672|GO:0006468
Seca11g05151 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05151 180 Gene3D Transferase(Phosphotransferase) domain 1 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05151 Seca-Chr11 146927215 146928400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05151 97 134 Receptor kinase-like Gene Family AT3G45860 55.263 1.98e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca11g05151 PK_Tyr_Ser-Thr 1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05151 - - cam:101513672 149.443