Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05148 ATGGCGTCACACTCACAGTACCCACCCGACTTAGATTCCGACTCCGTTGCTTCCTCCCCTCGCTCCGACCACTTCCACGACGCGCCGCCACGTGTTCGATTCATGTGCAGCTTCGGCGGAAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGTTACGTCGGCGGCGACACCCGAATCGTCGCCGTCAACCGCTCCATCTCCTTCTCCGCTCTCATCCTCAAGCTCTGTAAACTCTCAGGCATGAGTAATATAACTGCCAAGTACCAGCTTCCCAACGAGGATCTCGACGCGTTGATCTCTGTTACGACGGACGAAGACGTGGAGAACATGATGGACGAGTACGACCGCGTCGCACAGAATCATAACCCGCGATCGGCTCGGCTTCGGCTCTTCCTCTTCCCCGAAGGAGAAGATTCTAGAGCCAGCAGCATCAGCTCGCTACTTAACGGCTCAACCAACCGCGAGAATTGGTTCCTCGATGCCTTAAACGGCGGCGTTTCAGGACTCGAACGAGGCCGCTCCGAAGCGTCTTCTATGGTTTCGGAAGTACCCGATTACCTCTTCGGGTTGGATAACTCCGAAGAAACACAATCCCAAAGTCACCACCACCGCGAGCCTCGACCAAAGGAACGACTCGTTCTCCAAGATAACGTTTCCGTTTCGGATCCGGGTTCGCCCGCCCCGGTTGTCTCGTCCCCGTTTTGTTCCACGTCATCAGCGCCTTGCGTGCCTTCTATCCCGAACCTTCCCCCGGTTAAAACCAAACCCGAAAACCCGGTTCCTGACACGGTGTCCAAGGAAAATCAACTAGAAGCTGAAACGGGTGGGCAACCGAATCCGAATCCGAATCCATACCAGAGTAGCCCTGTAGTACACTATCCACCAGAAGCTGCTTATTCGGGTCATTCTGCAGTTCCTGTTTACTATGTTTCGGGTCCGGCTCAACCCGGAACTGTACCGGTCCACCCGGTACCTATGCAGGCACACTATCCCTTTGTTCAACAACCATATCACGCAATGATGCCAACTCAAGTTCCAATCGGGTACCATCATTTTGTTCAGGGTTCGGGTCAAGTATATGGTGCAGGGCCAGGGGTCAGGCATGTGACCCCGATGCACCCATATAGTCCGTCGCCGGCGGTGGTTCATGACGGTTTGAAACAACAGGTGTATCAAGCCGTGCCGAATTCCGGTTCTGTTCCGGTTTACCCGGCGATGGCGATGACAGGTGGGGATGAATCGCAGAGAGGCGGAGCGGAATTTGGGTCGGGTCGGGGCACCAACTCGTTGAATAACTGA 1302 0.5545 MASHSQYPPDLDSDSVASSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVNRSISFSALILKLCKLSGMSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNHNPRSARLRLFLFPEGEDSRASSISSLLNGSTNRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEETQSQSHHHREPRPKERLVLQDNVSVSDPGSPAPVVSSPFCSTSSAPCVPSIPNLPPVKTKPENPVPDTVSKENQLEAETGGQPNPNPNPYQSSPVVHYPPEAAYSGHSAVPVYYVSGPAQPGTVPVHPVPMQAHYPFVQQPYHAMMPTQVPIGYHHFVQGSGQVYGAGPGVRHVTPMHPYSPSPAVVHDGLKQQVYQAVPNSGSVPVYPAMAMTGGDESQRGGAEFGSGRGTNSLNN. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05148 433 MobiDBLite consensus disorder prediction 246 288 - -
Seca11g05148 433 PANTHER OS05G0427100 PROTEIN-RELATED 14 364 - -
Seca11g05148 433 Gene3D - 52 135 - -
Seca11g05148 433 MobiDBLite consensus disorder prediction 262 282 - -
Seca11g05148 433 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Seca11g05148 433 MobiDBLite consensus disorder prediction 1 16 - -
Seca11g05148 433 CDD PB1_UP2 35 134 - -
Seca11g05148 433 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Seca11g05148 433 MobiDBLite consensus disorder prediction 409 433 - -
Seca11g05148 433 MobiDBLite consensus disorder prediction 1 28 - -
Seca11g05148 433 SMART PB1_new 46 136 IPR000270 GO:0005515
Seca11g05148 433 SUPERFAMILY CAD & PB1 domains 47 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05148 Seca-Chr11 146885421 146887283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05148 26 171 MAP Kinase Kinase Kinase AT5G57610 45.946 3.27e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05148 - - aprc:113858359 742.651