Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05146 ATGGGGAGAAAATCATCGGTGGCGAAGGAGAAGGAAGAGGAGGAGGTTCTACCGGACGAACTCCGGTGCGGGCGAACAGACGGTCGACAATGGCGGTGCCGGCGGCGAGTGATGGAGGATCTGAAGCTGTGCGAGATTCACTACCTTCAAGGTCGTCATCGCCAGTACAAGGAGAAGGTTCCAGAGTCTCTGAAGCTTCAGAGGAGGCGGAAGAACGAGGATACCTCAACTGTTGCTGACAATGTGGAAGCTAGGGCACGGAGAGCGTGCAGAATAGCGAAGAAGATAAAGAGGAAGCGGAAAATCTCTTCGGAGGAGGCAGTGGTTGGTCCTGCTAGGAAGAAGGCCCTGAAGCAAGGTGGTGGTGACATGCAGTTGGAGCTGATAAGGATGGTTCTCAAGAGAGAGGTTGAGAAGAGGAAGAGGAACAGCAACAATAGCAAGAAGAACAACAAGAAGAAAAGGAAGAAGAAGAAAAAGGTGGAAGAAGAAGGAGGAGGGGTAGAAGGGGAATTGCATTACAGTGAAGGTGAGTTGAGGAGAGAATTGCCTAATGGTGTGATGGAAATCTCTCCTCCAGCTTCAACTCCACGTGATTACAACAATGTGGATTCACATTGTGATGTGAAAGTGGGTGTTGATTGTAAAGCTGTTACACCTCGTTACTTCAGGTCCAAGAATGTTGACAGGGTTCCTGTTGGCAAGTTGCAGATTGTACCATACGGATCAAACTTGAAGAAGGGTAACACTAAGAGGAAGAAGTGTCATTGGTGCCAGAGAAGTGATACTTGGAATCTCATAAAGTGTTCGAGCTGTCAGAAGGAGTTTTTCTGCATGGATTGCATCAAAGAGCGGTTTGTTATTGTTAAATTCATTTACACCCCCTCCCCTGGAACCCAATTTTGA 906 0.479 MGRKSSVAKEKEEEEVLPDELRCGRTDGRQWRCRRRVMEDLKLCEIHYLQGRHRQYKEKVPESLKLQRRRKNEDTSTVADNVEARARRACRIAKKIKRKRKISSEEAVVGPARKKALKQGGGDMQLELIRMVLKREVEKRKRNSNNSKKNNKKKRKKKKKVEEEGGGVEGELHYSEGELRRELPNGVMEISPPASTPRDYNNVDSHCDVKVGVDCKAVTPRYFRSKNVDRVPVGKLQIVPYGSNLKKGNTKRKKCHWCQRSDTWNLIKCSSCQKEFFCMDCIKERFVIVKFIYTPSPGTQF. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05146 301 MobiDBLite consensus disorder prediction 137 175 - -
Seca11g05146 301 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 285 IPR045109 GO:0032454|GO:0033169
Seca11g05146 301 MobiDBLite consensus disorder prediction 160 175 - -
Seca11g05146 301 MobiDBLite consensus disorder prediction 145 159 - -
Seca11g05146 301 Coils Coil 144 164 - -
Seca11g05146 301 ProSiteProfiles WRC domain profile. 17 63 IPR014977 -
Seca11g05146 301 Pfam WRC 18 59 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05146 Seca-Chr11 146800490 146801845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05146 18 57 GRF Transcription Factor Family AT2G22840 52.500 1.23e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05146 K15601 - gmx:100810673 331.257