Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05131 ATGGATAACTTTGATGATGTTTTAATTGTTGATTTGGACGAAAATAGAGATCCAGATTGTGCTATTAGTTCTGGTGAAAGTGGTAGTGAAGAGCATATTGATTTGGATGATCAAAAGGAGACTGCAGACTTAGATGCAGGAGATGATCAATATAAAAAGGTAATAGACTTGACAGCTGATGAAATACAGGGTCTAGAGTTTGGTAGTGAAGGGGAAGCTTATCAATTTTATCATACATATGCAAAATTCCATGGTTTTTTGATAAGGAAAGATGATGTCAGTCGGGATTTTAAGGGGAATATTATAATGCGGCAGTTTGTATGTAATAGAGAAGGATTAAGGAGCAAAAAGCACTTAATGAGGGTAGATAGAAAAAGAGAGCATAGACCAATCACCCGTACTAATTGTCAAGCTAGGCTTAGGATACACTTGAGTTACAAGACATCAAAATGGAAAGTTGTGTCCTTTGAGGACTCTCATAACCATGAACTAACCCCATCGAAAATCCCTGCTTACCGTGTCAAGACTAATGCAAATAAAGCTCAGGTGGATAACTTGCATTCAAATGATGTTAGAACATGTCACATATTGGGATACATGTTGGCCCAAAAAAGGGGATATGCTAGTGTTGGTATTTTGAAAAAGGATTTATACAACTATTTTGACCAGCATAAGCATGGTTGGATTAAGGATGAGGATGCACATGCTGCCTTAAGTTATCTACAAGGCAAAGCAGACCATGATCCCATGTTCTATTCAAAATACACAACTACTACTGATGGTAGATTGGAGCATCTTTTTTGGGTAGATGGAGGCAGCATAGGTGATTTTCAATGTTTTGGAGATGTTCTTGTATTTGACACCACATATAACAAAAACAAATACAACTATGGTCTTGTAATTTTCTCTGGGTGTAATCACCATTCACAGACCATTATATTTGGTTGTGCTTTGGTGTCTGATGAAACCGTTGGGACATATAAGTGGGTGTTGGAATCTTTTCTAGAAGCAATGTGCAGTAAACACCCGAAAGCTGTTGTGATTGATGGTGATGGTGCTATGAGAGATGCTATCAAGCATGTATTTCCAGATGCATCACATCGACTTTGTGCATGGCACTTGCATAATGCTGCGTGTGAAAATGTCAACAATTCTCCATTTTTGGAGGATTTCAAGACAGCAATATATTATAATTTTACCCCAGATGAATTCGAAGAGTACTGGAAGAAGATGGTTGTGAAACATGAGCTTGTAGGAAACAAGTGGATTTGTGAAACATATGAGAACAAGTCATTGTGGGCCGCTGCATACTTGCGTGATAAATTCTTTGGTCGTACAAGGACTATGTCTCAATGTGAAGCCATTAATTCACTAATAAAAGCATATGTTAGGAAAAAAAGCACCATTGTTGAATTTATGCATAATTTTCAGCAAGCTTTGAGGGAATACAGAAACAGTGAGTTGGCTGCCGATTTTAAGTCTCTTTTTTCAGAACCTGTGTTGACTACATCTCTGTACAAGATTGAGCATGAGGCTTCAAAAATTTACACATTGGAGATTTTTAAAGAAGTTAAACATGAGATTGAAGAGGTTGGTGCACTGAATCTTATTGAACGAATTGAAAATGGAGAGAAGTTGATGTTCAAGCTGAACAAGTATGGCAGACCTGATAATAAAATCCATGTCGTTTATGATACAACAAGGTTTAATTTTTCTTGTGATTGTCGACTTTTTGAATCTCGTGGCATTCCATGTTCCCATATTATTTGTGCCATGAAACATGAGCACATGGACTGTATTCCTAGCAGTTTGATTTACAAACGGTGGACAAAAACTGCTAAGAGTGATTTCATTTCCTCAGATCAGTCAGAGGAAATAGATTCTGGTGTCATGAAGGTTGCCTGTTTTGGGGCTATAGGTGCTGCTTGTAATAAGCTTTGTGATATTGTTGTCGAAAAGAGTGAGTATTTCAATGAGATCAGAGATGAAATCTTCAAGCTAACTAAAAAGTATGAGAATCTTGGGGATTCATGTAGCAAACATAGGTCATCTATAAAGGATATTGATGACCCCACTTTGGTGAAGACGATACATACTCCTGGAAAGAAGATGTATGGCAAGAAGAGGAGGCATTGTTCAAATTGTTATAGCACTAGACACACAATTAGGAGATGTCCAAGGCTCCTTGGTACAGATGATCAAAGTAGCAAGGATGATGAGTTATCACCTTCAGAGTCTTCTGGCATTAATAGAGAAGTTGATAGTGACAAAGAAGTAACACAATGTGATGAAAATAATGACCATGACACAGTGCTTACAAATTGCTCTACAAGCCATGATGTTAATAAGGGGATAGAGAAACTTAATGGTGATTGTAAAAGGAACGAAAAGAAAGTAAAATGTTCACAAAATTCAGTTAAGCACGCTAAAATCCAGCCCGCTGATTCTTCCAATGGAGCTAAGCAAATTCCCCAACAGGTACCTATTTTACCCCGACCCCAAAACTTAACATTTGGTTATGGCACATTAAGCCAAGGGGTGTCCAGTTTTCCCTCAAATTCCTCAGTTCCAGTTTTCCCTCATTATGGTGGGGTTCCTTTGTATCCAACACTTCCAATTTTCCCTCAGATTCCTCAGTATATGAGTGGAGTTCAGAATGTTAGCAGTGGTATATCTTGGAATGGCTCACATGAAGAAGTCACTAAAAATCGTGGTCAAGAAGAAGTCACTAAAAACCGCAGTCAAACTAGTGGTAAGCGTGGCGAGTCTTAG 2772 0.3806 MDNFDDVLIVDLDENRDPDCAISSGESGSEEHIDLDDQKETADLDAGDDQYKKVIDLTADEIQGLEFGSEGEAYQFYHTYAKFHGFLIRKDDVSRDFKGNIIMRQFVCNREGLRSKKHLMRVDRKREHRPITRTNCQARLRIHLSYKTSKWKVVSFEDSHNHELTPSKIPAYRVKTNANKAQVDNLHSNDVRTCHILGYMLAQKRGYASVGILKKDLYNYFDQHKHGWIKDEDAHAALSYLQGKADHDPMFYSKYTTTTDGRLEHLFWVDGGSIGDFQCFGDVLVFDTTYNKNKYNYGLVIFSGCNHHSQTIIFGCALVSDETVGTYKWVLESFLEAMCSKHPKAVVIDGDGAMRDAIKHVFPDASHRLCAWHLHNAACENVNNSPFLEDFKTAIYYNFTPDEFEEYWKKMVVKHELVGNKWICETYENKSLWAAAYLRDKFFGRTRTMSQCEAINSLIKAYVRKKSTIVEFMHNFQQALREYRNSELAADFKSLFSEPVLTTSLYKIEHEASKIYTLEIFKEVKHEIEEVGALNLIERIENGEKLMFKLNKYGRPDNKIHVVYDTTRFNFSCDCRLFESRGIPCSHIICAMKHEHMDCIPSSLIYKRWTKTAKSDFISSDQSEEIDSGVMKVACFGAIGAACNKLCDIVVEKSEYFNEIRDEIFKLTKKYENLGDSCSKHRSSIKDIDDPTLVKTIHTPGKKMYGKKRRHCSNCYSTRHTIRRCPRLLGTDDQSSKDDELSPSESSGINREVDSDKEVTQCDENNDHDTVLTNCSTSHDVNKGIEKLNGDCKRNEKKVKCSQNSVKHAKIQPADSSNGAKQIPQQVPILPRPQNLTFGYGTLSQGVSSFPSNSSVPVFPHYGGVPLYPTLPIFPQIPQYMSGVQNVSSGISWNGSHEEVTKNRGQEEVTKNRSQTSGKRGES. 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05131 923 MobiDBLite consensus disorder prediction 727 768 - -
Seca11g05131 923 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Seca11g05131 923 Pfam MULE transposase domain 283 375 IPR018289 -
Seca11g05131 923 MobiDBLite consensus disorder prediction 17 36 - -
Seca11g05131 923 ProSiteProfiles Zinc finger SWIM-type profile. 558 596 IPR007527 GO:0008270
Seca11g05131 923 SMART 26again6 571 598 IPR006564 GO:0008270
Seca11g05131 923 PANTHER OS01G0519700 PROTEIN 62 624 - -
Seca11g05131 923 MobiDBLite consensus disorder prediction 894 923 - -
Seca11g05131 923 MobiDBLite consensus disorder prediction 900 923 - -
Seca11g05131 923 MobiDBLite consensus disorder prediction 750 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05131 Seca-Chr11 146524467 146531043 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g05131 MULE 1.6e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05131 - - ccaj:109792835 964.526