LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g05110	ATGCACGGGAGGTATGTGGATGTGGCAAGGGAGAAGCGAGGTTTGGATTCGACTTCCGCTGAAGAAGGACAGCCTGATCGGAAGAGACCAGCTTTGGCGAGTGTAATTGTTGAAGCACTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCCCTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAGGTGGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAAGCTTAATGTAAAATTCAGGTCTTCTCCGAAACGGATAGAAGGCCCTGGTGGGAAAAATTTACAATTGCACTTCAAGACCAGGCTATCCCTTCCCCTCTTTACTGGAGGGAAAGTGGAGGGTGAGCAAGGGGCAGCCATACATATTGTTTTGATTGACGCAAACGCAGGCTATGTTGTCACGACTGGCCCAGAGTCATGTGTCAAACTAGATGTCATTGTCCTTGAGGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGATGAGTTTGACAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGACCTCTTTTAACTGGTGATCTGCAAGTCACACTGAAGGAGGGTGTAGGAACACTGGGTGAGCTCTCTTTTACTGACAACTCTAGCTGGATAAGAAGTAGGAAATTCAGGTTGGGGCTCAAAGTTTCCCCAGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCTGCCTTAAATGACGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCAGGCATATTTACTGTTGAAGACTTCCTGAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATAGCCTGATTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAGCTTTATGTATACTATCCTGATGATGCAAGAAACGTGGGTGTTGTTTTCAATAACATTTATGAGTTGAGTGGCCTAATTGCCAACGACCAATATTACTCAGCTGATTCTCTCTCTGAGAGTCAAAAGGTTTATGTAGACACGCTGGTGAAGAAGGCATATGATAATTGGATGCATGTTATCGAGTATGATGGGAAGTCTCTGGTAAATTACAATCAGGATAAGACCTTGGACACGGCCCATCCTCAGGCTCCAATGGGTTCCCATGAATATTCAAACTCAATTCAGCAGATTTCCATCCCAAGTTTGCCACTACCGGTACAAACAGGCCAGCCTTCAATGGATACAGGAGTTACAGTTGGAGGTTATCATGATGGTACAACTACCAGATTCTCCATGCAACCACAGAATGCTAATCTTAATTCTCCTATTCAATTTGATGATAATGCATATCCACTACAAAACCAGTTGATGAGTGTTCCACATCAAGCTCAACTTCCCAGAAATGAAAATGGGCTGACTCTTGGTCCATCACAATCAGCCACGCATGGCTTCCCAACTGTCAGCAGTTCAAATTCTACTTACAGAGGAGTTGAAGACTTCTTCTCAGAGGAGGAGATTCGCATTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGTATTTTTAACATGGGTGGCCCAGCCCATGCTTCCTTTAATGCCAATGAAGATGTGTACCCTAATTCATCTGCATACATGCCTGCAAACCCCATGAGCTACAATTTTGATGATGAGCCGAACCGTTCCTCAGGCAAAGCTGTTGTTGGCTGGCTTAAGCTGAAGGCAGCTTTGAGATGGGGCATTTTCGTTAGGAAGAAGGCTGCTGAAAGACGGGCTCAACTAGTTGAGTTGGATGACTCGTAG	1890	0.4492	MHGRYVDVAREKRGLDSTSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLNVKFRSSPKRIEGPGGKNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDANAGYVVTTGPESCVKLDVIVLEGDFNNEDDDNWSEDEFDSHIVKEREGKRPLLTGDLQVTLKEGVGTLGELSFTDNSSWIRSRKFRLGLKVSPGCCEGMRIREAKSEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRLVVRDPQRLRNILGSGMSNKMWDSLIEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLIANDQYYSADSLSESQKVYVDTLVKKAYDNWMHVIEYDGKSLVNYNQDKTLDTAHPQAPMGSHEYSNSIQQISIPSLPLPVQTGQPSMDTGVTVGGYHDGTTTRFSMQPQNANLNSPIQFDDNAYPLQNQLMSVPHQAQLPRNENGLTLGPSQSATHGFPTVSSSNSTYRGVEDFFSEEEIRIRSHEMLENEDMQHLLRIFNMGGPAHASFNANEDVYPNSSAYMPANPMSYNFDDEPNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS.	630

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g05110	629	Pfam	Calmodulin binding protein C-terminal domain	325	387	IPR046829	-
	Seca11g05110	629	Pfam	Calmodulin binding protein central domain	254	320	IPR046830	-
	Seca11g05110	629	MobiDBLite	consensus disorder prediction	1	28	-	-
	Seca11g05110	629	Pfam	Calmodulin binding protein-like N-terminal domain	95	242	IPR046831	-
	Seca11g05110	629	PANTHER	OS02G0177800 PROTEIN	10	544	IPR012416	GO:0005516

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g05110	Seca-Chr11	145969398	145974165	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g05110	7	624	Calmodulin-binding Proteins	AT5G57580	62.226	0.0	772

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g05110	-		-	gmx:100812605	1108.59