Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05045 ATGGTTTTCTTGACTATCGTTCTGCTCTTCCTTTCTCTTCTATTTATCATCAACTGGTATTCCAACTCAGCAACGAGCAACAAGAACTCACCCCCTTCACCTCCAAGAATTCCTCTACTTGGTAATCTTCATCAACTTGGCTTGCTCCCACACCGCACACTCCAATCTTTAGCTCAGAAATATGGTCCTTTAATGTTGCTTCATTTTGGGAAGGTGCCAGTGCTTGTGGTCTCCTCTGCTGATGCAGCCTCTATGGTAATGAAATCCCATGACTCTGTCTTCTGTGACAGGCCAGGGCGTAAAATATTTGATATTCTGTTATATGGCTTCAAAGATGTGGCAACTGCTCCATATGGTGAGTACTGGAGACAAGTAAGGAGTGTCTGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCAATCTTTTCGTCGTGTGAGAGAAGAGGAAACTTCTAGAATGATGGAAGTGATTAAGGAGTGTTCTTCTTCTTCTTCCTTGCCGGTGAATTTATCTGAGTTGTGCCCTGCAGTTACAAATGATATAATATGTAGAGTGGCTTTGGGAAAGAGATACAGTGAAGGAGGGACGAAATTTCATCATCTGTTATCGGAGTTTATGGAGTTATTAGGTTCTGTCTTTATAGGGGACTATATACCATGGCTTGATTGGTTGAGTAAGGTTAATGGTATGTATGGTAGAGCAGAGAGGGTGACCAAACATTTCGATGAGCTTATAGATGAAGTAATTGAGGAGCACATCAGGAATAGCAAGGATGGGCATGTTGATGTAGATAGTGAGGACCAGAACGATTTCGTGGATGTTTTGCTTTCGATCCAAAAGACAAACGCTATGGGCTTCTCAATTGATAGAACTTCAATAAAAGCTTTGATAGTGGACATGTTTGTTGCAGGTACTGACACTAGCTACACAGTCCTGGAGTGGGCACTGACAGAGCTGTTAAGGCACCCGGTTGTGATGCATAAATTGCAAGATGAGGTGAGAAGTGTGGTTGGTAACAGAACTCACGTGACTGAGGATGATCTGGGTCAGATGAAGTACTTGAAGGTTGTGATCAAAGAAGCGCTTCGCCTACATACTCCACTTCCCTTACTGGTTCCTCGGAGATGCATGAAAGATATCAAACTGAATGGCTATGACATTGCAGCTGGGACACAGATAATAGTAAATGCTTGGGGAATTGCCAGAGACCCTTCATATTGGGACCAACCCCTTGAGTTTAAACCAGAAAGGTTCCTCAATAGTTCAATAGATTTCAAGGGACATGATTTTGAATTTATCCCATTTGGAGCAGGAAGGAGGGGTTGTCCTGGACTGTCATTTGGCATTGCTGTGGTTGAAGTGGTACTAGCAAACCTTGTCCATCAATTTGATTGGTCATTGCCTGATGGAGCAACAGGGGAGGACTTGGACATGACTGAAACTGTTGGCCGAAAACTCCCATTCCATTTGATCACTATGGTTTTCTTGATTATCTTTCCGGTCTTCCTTTCTCTTGTATTAATCATCAAATGGTATTCCAATTTTGGAACCAGCAAGAACTCACCTCCTTCACCTCCAAGAATTCCTCTGCTTGGTAACCTTCATCAACTTGGATTGTTCCCACACCGCACACTCCAATCTTTAGCTCAAAAGTATGGCCCTTTAATGTTGCTTCATTGTGGAAAGGTTCCAGTGCTTGTGGTCTCCTCTGCTGATGCAGCCTCTATGGTAATGAAGACCCATGACTTGGTTTTCTGTGACAGGCCAGGGCGTAAAATATTTGGCATCCTGTTTTATGGCTTCAAAGATGTGACAACTGCTCCATATGGTGAGCACTGGAGACAAGTAAGGAGTGTTAGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCAATCTTTTCGCCGTGTGAGAGAGGAGGAAACTGCAAGAATGATGGAAAAGATTAAGGAGTGTTCTTCTTCTTCTTCCTTGGCGGTGAATTTATCAGAGTTGTGCTCCACACTTACTAATGATATAATATGTAGGGTGACTTTGGGAAAGAGATGCCGTGAAGAAGGAGGGAGGAAGTTTCAGCATCTGTTATTGGAGTCTATGGAGTTATTAGGTGCTGTCTGTATAGGGGACTATATACCATGGCTTGATTGGTTGAGTAAGGTTAATGGTATGTATGGTAGAGCAGAGAGAGTTGCCAAACATTTGGATGAGTTTATAGATGAAGTAATTGAGGAGCACATTAATTGTAGATCCAAGAATAGCAATGAGGACCAGAATGATTTCGTGGATGTTTTGCTTTCGATCCAAAAGACAAACGCTATTGGCTTCCCAATTGATAGAACAACAATAAAGGGTTTGATAATGGTAAGATAA 2367 0.4237 MVFLTIVLLFLSLLFIINWYSNSATSNKNSPPSPPRIPLLGNLHQLGLLPHRTLQSLAQKYGPLMLLHFGKVPVLVVSSADAASMVMKSHDSVFCDRPGRKIFDILLYGFKDVATAPYGEYWRQVRSVCVLHLLSNKRVQSFRRVREEETSRMMEVIKECSSSSSLPVNLSELCPAVTNDIICRVALGKRYSEGGTKFHHLLSEFMELLGSVFIGDYIPWLDWLSKVNGMYGRAERVTKHFDELIDEVIEEHIRNSKDGHVDVDSEDQNDFVDVLLSIQKTNAMGFSIDRTSIKALIVDMFVAGTDTSYTVLEWALTELLRHPVVMHKLQDEVRSVVGNRTHVTEDDLGQMKYLKVVIKEALRLHTPLPLLVPRRCMKDIKLNGYDIAAGTQIIVNAWGIARDPSYWDQPLEFKPERFLNSSIDFKGHDFEFIPFGAGRRGCPGLSFGIAVVEVVLANLVHQFDWSLPDGATGEDLDMTETVGRKLPFHLITMVFLIIFPVFLSLVLIIKWYSNFGTSKNSPPSPPRIPLLGNLHQLGLFPHRTLQSLAQKYGPLMLLHCGKVPVLVVSSADAASMVMKTHDLVFCDRPGRKIFGILFYGFKDVTTAPYGEHWRQVRSVSVLHLLSNKRVQSFRRVREEETARMMEKIKECSSSSSLAVNLSELCSTLTNDIICRVTLGKRCREEGGRKFQHLLLESMELLGAVCIGDYIPWLDWLSKVNGMYGRAERVAKHLDEFIDEVIEEHINCRSKNSNEDQNDFVDVLLSIQKTNAIGFPIDRTTIKGLIMVR. 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05045 788 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 Pfam Cytochrome P450 522 769 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 CDD CYP71-like 60 487 - -
Seca11g05045 788 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Seca11g05045 788 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 Gene3D Cytochrome P450 16 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 Gene3D Cytochrome P450 516 787 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 FunFam Os08g0105600 protein 515 787 - -
Seca11g05045 788 SUPERFAMILY Cytochrome P450 522 786 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 SUPERFAMILY Cytochrome P450 31 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05045 788 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 491 - -
Seca11g05045 788 FunFam Cytochrome P450 83B1 18 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05045 Seca-Chr11 144020994 144030857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05045 516 786 Cytochrome P450 AT3G48310 52.399 4.75e-90 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05045 - - gmx:100819183 727.243