Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05037 ATGGAGAAAGTTATAGGAGCTTCCTATGGTATAGCAAAGAGTTGTGTGGGGATGGGTTCGATAGGTGTGATGAGACCAAAGCTGGTGAAGTCTACCTTCCATGTTGTTATGGTTGGAGTTTTGGGTATTTATGGACTTATTATTGTTGTCATGATCAGTACTGGTATTAACCCCAAGGCCAAATTTGATTACTTCTTTGATGGTTATGCCCATGTCTCCTATGGTCTTACCCATGCTGGCTAG 243 0.4198 MEKVIGASYGIAKSCVGMGSIGVMRPKLVKSTFHVVMVGVLGIYGLIIVVMISTGINPKAKFDYFFDGYAHVSYGLTHAG. 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05037 80 NCBIfam V-type ATPase subunit C 4 77 IPR011555 GO:0033179|GO:0046961|GO:1902600
Seca11g05037 80 Gene3D - 1 79 IPR035921 -
Seca11g05037 80 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05037 Seca-Chr11 143687281 143687523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05037 5 77 Primary Pumps ATPases(2) AT4G38920 71.622 8.83e-29 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05037 K02155 - gmx:100779290 100.523