Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05031 ATGGTTTTCTTGACTATATTTCTAGTCTTCCTTTCTCTTGTATTCATCATCAAATGGCATTCCAATTCTGCAACAAGCAAGAACTCACCCCCTTCACCTCCAAGATTTCCCCTACTCGGTAATCTCCATCAACTTGGATTCCTCCCACATCGCACACTCCAATCTTTAGCTCAAAAGTATGGCCCTTTAATGTTGCTTCATTTCGGGAAGGTGCCAGTACTTGTGGTCTCCTCTGCTGATGCAGCCTCTATGGTAATGAAAGCCCATGACTTGGTCTTCTGTGACAGGCCACAGCGTAAAATTTTTCGTATCCTGTTATATGGTTCTAAAGATGTGGCAAGTTCTTCATATGGTGAATACTGGAGGCAAGTAAGGAGTGTCAGTGTGTTACACCTTTTAAGTAACAAAATGGTTCAGTCATATCGTCGAGTGAGAGAAGAGGAAACTGCTAGAATGATGGAAAAGATAAAGGAGTGTTCTTTTTCTTCTTCTTACTTGCCAGTGAATTTATCTGAGTTGTGCTCTGCAGTTACAAATGATATAATATGCAGGGTGGCGCTGGGAAAGAGATACCGTGAAGAAGGAGGGAGGAAGTTTCAGGAACTGTTGTTGGAGTTTGGGGAGTTATTGGGTGCTGTCACTATAGGGGACTTTATACCATGGCTTGATTGGTTGAGTAAGGTTAATGGTTTCTATAGCAGAGCAGAGAGAGTGGCCAAATATATGGACGAGTTTATAGATGAAGTAATTGATGAGCATATTACTTGTACATCGAGGAATAGCATGGATGGTGAAGACCAGAACGATTTTGTGGATGTTTTGCTTTCGATCCAAAAGACAAACGCTATTGGCTTCCCAGTTGATAGAACTACAATAAAGGCTTTGATAGTGGACATGTTTTTTGCAGGTGCTGACACTACTTCCATAGTCCTGGAGTGGGCAATGGCAGAATTGTTAAAAGAACCCAATTGTGATGCATAA 981 0.4159 MVFLTIFLVFLSLVFIIKWHSNSATSKNSPPSPPRFPLLGNLHQLGFLPHRTLQSLAQKYGPLMLLHFGKVPVLVVSSADAASMVMKAHDLVFCDRPQRKIFRILLYGSKDVASSSYGEYWRQVRSVSVLHLLSNKMVQSYRRVREEETARMMEKIKECSFSSSYLPVNLSELCSAVTNDIICRVALGKRYREEGGRKFQELLLEFGELLGAVTIGDFIPWLDWLSKVNGFYSRAERVAKYMDEFIDEVIDEHITCTSRNSMDGEDQNDFVDVLLSIQKTNAIGFPVDRTTIKALIVDMFFAGADTTSIVLEWAMAELLKEPNCDA. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05031 326 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 323 - -
Seca11g05031 326 SUPERFAMILY Cytochrome P450 30 324 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05031 326 Pfam Cytochrome P450 30 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05031 326 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05031 326 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05031 326 PRINTS E-class P450 group I signature 311 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05031 326 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05031 326 Gene3D Cytochrome P450 14 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05031 Seca-Chr11 143464479 143465783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05031 24 324 Cytochrome P450 AT3G48270 51.656 3.97e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05031 - - gmx:100819183 451.825