Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05026 ATGTCGGCTTTTTTGCCAAGTTCTATTCCACTGGAAAATTTCCATTCATTCCCCATGCTTTCCTTAACCATCTTTCTGGTCTTGCTTTCTCTTCTATTCATCATCAAATGGTATTCCAATTCTGCAACCAGCAAGAACTCACCCCCTTCACCTCCAAGAATTCCTCTACTTGGTAATCTTCATCAACTTGGATTGTTCCCACACCGCACACTCCAATCTTTAGCTCAAAAGTATGGCCCTTTAATGTTGTTTCATTTTGGGAAGGTGCCAGTACTTGTGGTCTCCTCTGCTGATGCAGCCTCTAAGGTAATGAAAACCCATGACTTGGTCTTCTCTGACAGGCCACAGCGTAAAATATTTGATATCCTGTTATATGGCTCCAAAGATGTGGCAAGTGCTACATATGGTGAGTACTGGAGACAAATAAGGAGTGTCTGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCAATCTTTTCGTCGTGTAAGAGAGGAGGAAACTGCTAGAATGATGGAATATATTAAGGAGTGTTCTTCTTCTTCTTCTTCCTTGCCGGTGAATTTATCTGAGTTGTGCTCTACAGTTACGAATGACATAATATGTAGGGTGGCTTTGGGAAAGAGATACCGTGAAGGAGGGAGGAGGTTTCAGCAGCTGATATTGGAGTTTGGGGAGTTATTAGGATCTATCTCTATAGGGGACTATATACCTTGGCTTGATTGGTTGGGTAAGGTTAATGGTATGTATGGCAGAGCAGAGAGAGTGGCAAAACATTTGGATGAGTTTATAGATGAAGTAATTGAGGAACACATTAGTTGTTGGTCAAGGAATAGCAAGGATGGGCATGTTGATTTAGATAGTAAAGACCAGAATGATTTTGTGGACGTTTTGCTTTTCATCCAAAAGACAAGTTCTATTGGCTTCCCAATTGATAGAACTGCAATAAAAGCTTTGATACTGGACATGTTTGTTGCAGGTACTGATACTAGCTACACAGTACTAGTGTGGGCAATAACAGAACTGTTAAGGCACCCAGTTGTGATGCATAAATTGCAAGATGAGGTGAGAAGTGTGGTTGGTAACAGAACTCAGGTAACTGAGGATGATTTGGGTGACATGAAGTACTTGAAGGCTGTGATCAAAGAAACGCTTCGCCTCCATACTCCACTTCCCTTACTAGTTCCTCGGAGATGCATGAAAGATATCAAACTAAATGGTTATGACATTGCAGCTGGCACACAGGTAATAGTAAATGCTTGGGGAATTGCAAGAGACCCTTCATATTGGGACCAACCTCTAGAGTTTAAACCAAAAAGGTTCCTCAATAGTTCAATAGATTTCAAAGGACATGATTTTGAATTTATCCCCTTTGGAGCAGGAAGGAGGGGTTGTCCTGGACTGCTGTTTGGAATTGCTGTGGTTGAGGTGGTACTAGCAAACCTTGTCCATCAATTTGATTGGTCATTGCCTGATGGAGCAACAGGGGAGGACTTGGACATGGCTGAAACTGTTGGCCTTGCCCTTCATAGAAAATGTCCTCTGCTGGCAGTAGCAACTAAATATGAGAGAATTGGATAA 1578 0.4189 MSAFLPSSIPLENFHSFPMLSLTIFLVLLSLLFIIKWYSNSATSKNSPPSPPRIPLLGNLHQLGLFPHRTLQSLAQKYGPLMLFHFGKVPVLVVSSADAASKVMKTHDLVFSDRPQRKIFDILLYGSKDVASATYGEYWRQIRSVCVLHLLSNKRVQSFRRVREEETARMMEYIKECSSSSSSLPVNLSELCSTVTNDIICRVALGKRYREGGRRFQQLILEFGELLGSISIGDYIPWLDWLGKVNGMYGRAERVAKHLDEFIDEVIEEHISCWSRNSKDGHVDLDSKDQNDFVDVLLFIQKTSSIGFPIDRTAIKALILDMFVAGTDTSYTVLVWAITELLRHPVVMHKLQDEVRSVVGNRTQVTEDDLGDMKYLKAVIKETLRLHTPLPLLVPRRCMKDIKLNGYDIAAGTQVIVNAWGIARDPSYWDQPLEFKPKRFLNSSIDFKGHDFEFIPFGAGRRGCPGLLFGIAVVEVVLANLVHQFDWSLPDGATGEDLDMAETVGLALHRKCPLLAVATKYERIG. 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05026 525 PANTHER CYTOCHROME P450 71B11-RELATED 30 519 - -
Seca11g05026 525 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Seca11g05026 525 SUPERFAMILY Cytochrome P450 48 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 FunFam Cytochrome P450 83B1 34 517 - -
Seca11g05026 525 Gene3D Cytochrome P450 34 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 Pfam Cytochrome P450 48 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05026 525 CDD CYP71-like 77 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05026 Seca-Chr11 143262197 143265044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05026 45 519 Cytochrome P450 AT3G48270 52.101 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05026 - - gmx:100819183 798.119