Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04944 ATGAGGCACCGTTTAGCAGCTGTGATAGGGCGCTTCTCCGGTGGTGGTCCTGAAGTAGATAACGGAGACCAAAGAGGCACATCCGCGAGCCGCGGTGGCTGGAAGTGGTGTTTCGCAGCACGACGGTTGATGTCTGCCATAAGTGGGCTGCAGGGTGAAATAAACGGATTTAGTTCAAATACAATGGTTATTGTTTCAATTTTAGTCTTAGTGGCTTTATTCAGCATACAACGGTTTAGTACCAGTAAAGTGGGTTTCATGTTTTCCCCTATACTTGCTCTATGGTTCTTTTCTCTGGGCTCTATTGGAATTTATAATATAGCTAAGCATGATGCTATTGTTCTGAGAGCATTCAATCCCGCTTATATTTATTATTTCTTTAAGAAGAATGGCAAAAATGCATGGTCAACTCTTGGTGGTTGTGTTCTGTGTGTTACAGGTTCAGAAGCAATGTTTGCTGATCTGGGTCATTTTTCTGTAAGAGCAATACAGATTGCCTTCACTTTCGTGGTATTTCCCTGTCTTCTCCTTGCATATATGGGCCAAGCTGCTTATTTGCTGAAGAATCCTTCTTCTTATTCAAATACATTCTATGATTCTGTTCCAGATAGTCTCTTCTGGCCAATGTTTGTGATAGCCACACTTGCTGCTATGATTGGCAGCCAAGCAATGATATCTGCTACATTTTCATGCATAAAGCAATCTATGGCTCTGGGATGCTTTCCCAGGCTCAAGATAATTCACACCTCAAGGAAGTTCATGGGTCAAATTTACATCCCTGTAATTAACTGGTTTCTAATGGTCATGTGCATAGTTGTCATTTCCATCTTCCGAAGCACTACTGACATTGCAAATGCATATGCAGTCCTAGCAAAACTCTTAGAAGGTGGCTGGCTTCCACTTGTCTTTGCTACCTGTTTCCTCTCAGTGATGTACATATGGAACTATGGAAGTGTGTTAAAGTACAGAAGTGAAGTTAGGGAAAATATTTCAATGGACTTGATGCTTGATCTTGGCTCCAATCTTGGAACAGTAAGAGTGCCAGGATTAGGATTGCTACATACTGAGCTTGTTCAAGGCATTCCCTCCATTATTCTACAGTTCTTGCTTAGCCTTCCAGCTCTTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTCCCTATCCCAGTGGTTCCTCAAGAGGAAAGGTTTCTATTTAGAAGAGTTTGTCCAAAAGATTACCACATGTTCCGCTGTGTTGCCAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCAAGCATTTGAGCAACTTCTTATTGAAAGTCTTGAGAAATAA 1323 0.4135 MRHRLAAVIGRFSGGGPEVDNGDQRGTSASRGGWKWCFAARRLMSAISGLQGEINGFSSNTMVIVSILVLVALFSIQRFSTSKVGFMFSPILALWFFSLGSIGIYNIAKHDAIVLRAFNPAYIYYFFKKNGKNAWSTLGGCVLCVTGSEAMFADLGHFSVRAIQIAFTFVVFPCLLLAYMGQAAYLLKNPSSYSNTFYDSVPDSLFWPMFVIATLAAMIGSQAMISATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMVMCIVVISIFRSTTDIANAYAVLAKLLEGGWLPLVFATCFLSVMYIWNYGSVLKYRSEVRENISMDLMLDLGSNLGTVRVPGLGLLHTELVQGIPSIILQFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHQAFEQLLIESLEK. 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04944 440 Pfam K+ potassium transporter 289 421 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g04944 440 Pfam K+ potassium transporter 43 288 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g04944 440 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 44 289 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04944 Seca-Chr11 140995591 140999013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04944 40 440 Inorganic Solute Cotransporters AT1G60160 70.694 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04944 K03549 - gmx:100814419 671.003