Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04921 ATGGCCGAGGTTTCCACTTCAGCGTACAAGGAATATGTCGCAGGCTTGCTCGCTGGCGTTGCTGCTGTAGCCACTGGCCACCCCTTTGACACAGTAAAGGTGAAGCTGCAAAAGCACAACACAGAAGGACATATAATTCAGTACAGAAATGGATTGCATTGCACAGCAAGGATATTGCAAACTGAAGGAATTAAAGGACTTTATAGAGGAGCAACATCATCTTTTGCTGGGATGGCTTTGGAAGGGTCCCTTTTTTTCGGCATTTATTCCCAGACAAAAATGTACCTTCAGGGTGGTGTGCAAAGTGGCGAACCACGGCCTCAAGTGATAATACCATCTGCAGCTTTTAGTGGTGCCATAAACAGTTTTGTGTTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATCCAAGGCGCTGACTCTTTGGTTCCAATGTCCAATAGATACAGTAGTCCCCTTGATTGTGCCCTTAAAACTTTAAAAAGTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTGTACAACATTGCTTAGAGAATCCATAGGGAATGCTACCTTTTTCAGCATATACGAAAATATGCGTTATCACATGCATTCACATATCAAACCTGCTTCATCCAATCACAGCAACCTGATTGATATTGGAATTGGGATTGTTACTGGTGGCATTAGTGGTGTGGCTTTTTGGTTGGTAGTTTTGCCCCTTGACGTGGCGAAGACTCTAATTCAGACAAACCCTGATAAAAACTGCTCAAGAAATCCTTTTCAGATCTTGAGTTCAATCTACAGAAGGGCTGGATTGAAGGGGTGCTATACAGGTCTTGGTCCTACAGTAAGTCGAGCATTTCCTGCTAATGCAGCAACAATTGTCACATGGGAGTTAGCATTGAAAGTGTTAGGCATTAAGCATGACTGA 918 0.4346 MAEVSTSAYKEYVAGLLAGVAAVATGHPFDTVKVKLQKHNTEGHIIQYRNGLHCTARILQTEGIKGLYRGATSSFAGMALEGSLFFGIYSQTKMYLQGGVQSGEPRPQVIIPSAAFSGAINSFVLGPTELIKCRMQIQGADSLVPMSNRYSSPLDCALKTLKSEGVKGIFRGGCTTLLRESIGNATFFSIYENMRYHMHSHIKPASSNHSNLIDIGIGIVTGGISGVAFWLVVLPLDVAKTLIQTNPDKNCSRNPFQILSSIYRRAGLKGCYTGLGPTVSRAFPANAATIVTWELALKVLGIKHD. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04921 305 SUPERFAMILY Mitochondrial carrier 7 294 IPR023395 -
Seca11g04921 305 Gene3D Mitochondrial carrier domain 111 304 IPR023395 -
Seca11g04921 305 FunFam Mitochondrial amino acid carrier 180 304 - -
Seca11g04921 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Seca11g04921 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Seca11g04921 305 Pfam Mitochondrial carrier protein 219 300 IPR018108 -
Seca11g04921 305 Pfam Mitochondrial carrier protein 6 97 IPR018108 -
Seca11g04921 305 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Seca11g04921 305 Gene3D Mitochondrial carrier domain 2 110 IPR023395 -
Seca11g04921 305 FunFam Mitochondrial carrier protein 2 109 - -
Seca11g04921 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Seca11g04921 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 6 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04921 Seca-Chr11 140184287 140190615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04921 4 300 Antiporters AT1G79900 29.801 1.27e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04921 K15109 - gmx:100815087 512.301