Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04873 ATGCTATATACAACCTATGCCATATTTTTGTCTCTCTTCCTTGTTTTTTTCCTATTCATGAGAAGCAACAGAAGGCGCACTGGTAAGCCACCACCAGAAGCTGGCGGTGCATGGCCTTTGATCGGACACCTCCACCTTTTAGGTGGGCCCCAGCCACCTCACGTTACCTTGGGTGAAATGGCCGACAAACACGGACCAGTCTTCACCTTGCGTTTGGGTGTTCACCAAACATTGGTGGTGAGCAGTTGGGAAATGGCAAAACAGTGTTTTACCGTAAACGACAAAGCGTTTGCTTCCCGTCCCAAATCTGTAGCCATGGAAATTTTGGGGTACAACTTTTCCATGTTAGGATTCAGTCCCTACGGTTCCTATTGGCGCCACGTGCGCAAGATAGCCACCCTGGAGGTCCTCTCTTCCCATCGAATAGAGATGCTCAAACACGTCATGGAATCTGAGGTGAAGACAGCGATGAAAGAGAGTTACGATTATTGGCTAAGGATGAATGAGAGTGGTTCTGGAAAGGCAGTGACGGAAATGAAGAAATGGTTTGGGAACATAACACTGAATGTTTTGTTCAGAACTGTGGTAGGAAAACGTTTTGTTGGAGACGAGGAAGAGAAGGAACGGATCCGGAAAACATTTAGGAAGGTGTTCGATCTCAGCGGTTCATTTGGTTTGTCTGATGCGTTGCCGTTTTTGAGATGGTTGGATTTGGATGGAAGAGAGAAGGAAATGAAGAAGACGATCAAAGAGTTAGATAACTTTGTTCAAGTTCGTCTTCATCAACACAAACACAAAAGGAACACTAACCATGACCATGACTTCATGGACGTGCTTCTCTCCAATGTTGATGATGAAGGTTTTGATGGTCGTGATGCTGATACCATAATCAAAGCTACATGCCTGGCACTAATTTTAGCTGGCACAGACACCACAACAGGAACATTAACTTGGGCTCTCTCCTTACTTCTAAACAATCCTAAGGTCCTAAACAAGGCTATACATGAATTAGACAGACAGGTTGGGAGGGAAAAGATGGCAATGGAATCAGACTTGAAGAAGCTAGAGTATCTCGAAGCCATCATCAAGGAAACACTTCGCTTGTATCCAGCCGCACCACTCAATTTGCCTCATGAGTCCATGGAAGATTGTATTGTGGGTGGATACCATATAGTTGCTGGCACACGTCTTTTAACTAACATTTCAAAACTTCAACGAGATCCCTTGTTATATTCTAATCCCTTGGAGTTTCGCCCAGAGAGATTCCTCACAACCCACATGAATGTTGATCTCAGGGGACATTTTGAATTAATTCCATTCGGTGCAGGCAGAAGAATATGTCCTGGACTCTCATTTAGTCTTCAATTAATGCAAATTTCACTTGCTACTCTATTGCATGGGTTTGACATAGAGACTCTTGATGGGGCACCGGTTGACATGCTTGAACAAAGTGGGTTAACCAACATCAAAGCTTCCCCTCTTCAGGTCATTCTTAAACCACGTCTATCTGTTCAAGTTTATAGTCAAAAGTAA 1533 0.4397 MLYTTYAIFLSLFLVFFLFMRSNRRRTGKPPPEAGGAWPLIGHLHLLGGPQPPHVTLGEMADKHGPVFTLRLGVHQTLVVSSWEMAKQCFTVNDKAFASRPKSVAMEILGYNFSMLGFSPYGSYWRHVRKIATLEVLSSHRIEMLKHVMESEVKTAMKESYDYWLRMNESGSGKAVTEMKKWFGNITLNVLFRTVVGKRFVGDEEEKERIRKTFRKVFDLSGSFGLSDALPFLRWLDLDGREKEMKKTIKELDNFVQVRLHQHKHKRNTNHDHDFMDVLLSNVDDEGFDGRDADTIIKATCLALILAGTDTTTGTLTWALSLLLNNPKVLNKAIHELDRQVGREKMAMESDLKKLEYLEAIIKETLRLYPAAPLNLPHESMEDCIVGGYHIVAGTRLLTNISKLQRDPLLYSNPLEFRPERFLTTHMNVDLRGHFELIPFGAGRRICPGLSFSLQLMQISLATLLHGFDIETLDGAPVDMLEQSGLTNIKASPLQVILKPRLSVQVYSQK. 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04873 510 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Seca11g04873 510 FunFam Cytochrome P450 82C4 21 499 - -
Seca11g04873 510 SUPERFAMILY Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PANTHER CYTOCHROME P450 82C3-RELATED 8 507 - -
Seca11g04873 510 Gene3D Cytochrome P450 16 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04873 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04873 Seca-Chr11 138889808 138895880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04873 4 507 Cytochrome P450 AT4G31940 47.126 5.96e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04873 - - gmx:100778017 710.294