Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04870 ATGGATTCGGATAATCTCCTCTCACAGTCAACCTTGTCATTTACAATCTTTGGCACATTACTGTGTCTTTTTCTTCTATTTTGGCTACTGAGAAGCCGAACAGGTATAGCTACAAAGCCACCACCAGAAGCTGGCGGTGCTTGGCCTTTGATCGGACACCTCCACCTTTTAGGTGGGCCCCAGCCACCTCACGTTACATTGGGTAACATGGCCGATAAATATGGACCAGTCTTCACCTTTCGTATGGGTGTTCACCGAACCTTGGTGGTGAGCAGTTGGGAAATGGCTAAACAGTGTTTTACTGTAAACGACAAAGCGTTCGCTTCCCGTCCCAAGTCTTTAGCTACGGAAATTTTGGGCTATAACTTTTCCATGTTAGGATTCAGTCCCTACGGTTCCTATTGGCGCCACGTGCGCAAGATAGCAACCTTGGAGGTCCTCTCTTCCCATCGAATAGAGATGCTGAAGCACGTCATGGAATCTGAGGTGAAGGCAGCGATGAAAGAAAGTTACGATTATTGGCTAAAGATGAATGAGAGTGGTTCTGGAAAAGCAGTTACCGAAATGAAGAAATGGTTTGGGAACATAACACTGAATGTTATGTTCAGAACGGTTGTGGGAAAACGGTTAGTTGGGGCGGGTTGTGATGGTGATGATGAGGAAGAGAACGAACGGATCTCGAAAGCGGTTAGGGACTTCTTTGATTTGAGTGGGTCATTTGCTGTCTCCGATGCGATGCCGTTTTTGAGATGGTTGGATTTGGACGGACAAGAGAAACAAATGAAGAAGACGGCAAAAGAGTTAGATGACTTCGTTCAAGTTTGGCTTGATCAACACAAACAAAACAGGAAAAGTACTGCTTCTGGGGAACTGAAGGGTAACCATGACTTCATGGACGTGCTTATTTCCACCGTTGATGATGAAGGTTTTGACGGTCATGACCCCGATACCATAGTCAAGGCTACATGTCTGGCACTGATTTTAGCTGGCACAGACACTACAACGGGGACTTTGACTTGGGCTCTCTCATTACTTCTCAACAACCGTGAAGTACTAAACAAGGCCATACATGAGTTAGACACACAAATTGGGAGGGAAAATATGGCAGTAGAATCAAACTTGAAGAAATTGGAGTATCTCCAAGCCATCATAAAGGAAACACTACGCTTGTACCCAGCCGGACCACTCAACGTGCCTCACGAGTCCGTGGAAGACTGTATTGTGGGTGGATACTATGTACCTGCTGGCACACGTCTCTTAACTAACATTTCAAAACTTCAACGAGATCCCTTGTTATATTCTGATCCCTTAGAGTTCCGCCCAGAAAGATTTCTTACAACCCATAAGGATGTTGATCTTAGGGGCCAACATTTTGAATTGATTCCATTCGGTGCAGGGAGAAGAATGTGTCCTGGACTCTCATTTGGTCTTCAACTAATGCAAATTACACTTGCTACTTTGCTACATGGGTTTGACATAGTGACTCTTGATGGTGGACCGGTTGATATGCATGAACAAAGTGGGTTAACCAACATCAAAGCCTCTCCGCTCCAAGTCATTTTTATGCCACGTCTATCTACCCAAGTTTATGGTCAAAATTAA 1602 0.4482 MDSDNLLSQSTLSFTIFGTLLCLFLLFWLLRSRTGIATKPPPEAGGAWPLIGHLHLLGGPQPPHVTLGNMADKYGPVFTFRMGVHRTLVVSSWEMAKQCFTVNDKAFASRPKSLATEILGYNFSMLGFSPYGSYWRHVRKIATLEVLSSHRIEMLKHVMESEVKAAMKESYDYWLKMNESGSGKAVTEMKKWFGNITLNVMFRTVVGKRLVGAGCDGDDEEENERISKAVRDFFDLSGSFAVSDAMPFLRWLDLDGQEKQMKKTAKELDDFVQVWLDQHKQNRKSTASGELKGNHDFMDVLISTVDDEGFDGHDPDTIVKATCLALILAGTDTTTGTLTWALSLLLNNREVLNKAIHELDTQIGRENMAVESNLKKLEYLQAIIKETLRLYPAGPLNVPHESVEDCIVGGYYVPAGTRLLTNISKLQRDPLLYSDPLEFRPERFLTTHKDVDLRGQHFELIPFGAGRRMCPGLSFGLQLMQITLATLLHGFDIVTLDGGPVDMHEQSGLTNIKASPLQVIFMPRLSTQVYGQN. 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04870 533 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 Pfam Cytochrome P450 44 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Seca11g04870 533 Gene3D Cytochrome P450 30 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 FunFam Cytochrome P450 82C4 31 522 - -
Seca11g04870 533 PANTHER CYTOCHROME P450 82C3-RELATED 21 530 - -
Seca11g04870 533 CDD CYP82 75 524 - -
Seca11g04870 533 SUPERFAMILY Cytochrome P450 46 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g04870 533 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04870 Seca-Chr11 138836567 138840918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04870 14 530 Cytochrome P450 AT4G31940 48.948 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04870 - - gmx:100778017 752.281