Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04869 ATGGACTTTAATAGTGATGATTCAGCTGTTAATCTGGATGATGATAGGGACGTAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGAAATGATATACATAGTGATGAGGGAAATGAGTCTATTCACCCAGAGGCTGATATGGATGAGGAGAATTATGTTCTGGATACTGATGTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAATGATGATATAAGGGCTTTGGAGTTCGCTAGTGAAGAGCATGCGTACAATTTTTACTTTTCTTATGCAAAATGTAAAGGATTTGCTATGAGGAAGGATGATGTTATTCGTGACAAAAAAGGGATGGTCATAATGCGACAGTATTTATGTAGTAGGGCTGGTCTGAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAACACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAAACAGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAGTAATCCAGTGTTTTTTTCAAGATTTTTATGTTCTGAGGATGGTAAAGTTACTCATCTATTCTGGTGTGATGCAAATAGTCGTGCAGATTTTCAATTTTTTGGGGATGTGCTCGCATTTGATGCAACATACAAGAAGAACAGATATAAGTATCCATTGGTGATATTTTCTGGGAAAAATCATCACTCTCAAACAGTAATATTTGGGTGTGCACTCATTGCTGATGAAACAATTGATACTTATAAGTGGGTGCTAAGGATGTTTTTGGAAGCAATGTTCAACAAGCATCCAGCAGCAGTGGTGACTGATGGAGATGGTTCTATGAGGGAAGTTATTAAGGCAGTATTTCCAAATGCCTCTCATAGGTTATGTGGATGGCATTTGAATAAGAATGCATGTGAAAATGTTAAGAATCCAAAATTTTTGGATGATTTCAAGAAAGCAATGTATAGTAATTTCACTCCAAATCAATTTGAAGAGTTTTGGGAGGAAATGGTTACCAAACATGGTCTACAAGGTAATAGGTGGGTTAAGAAAACCTATGATATCAAGGAAATGTGGGCCTCTGCCTATTTACGTGACAAATTCTTTGCTCGCATAAGAACGACATCTCAATGTGAAGGAATTAATTCACTAATAAAGGCTTATGTTAGGAGTAAGAATACTATTATAGAATTTATTCGTAATTTTGAACATGCTCTTAGGGAATATAGGTACAAAGAATTGTGTTCTGACTTTAATTCTATTTATTTTGAACCTGTTCTTACTACCTCACTTCAGAAGATAGAGCGTCAAACTTCTAAGGTGTTCACTTTGGATATTTTTAAAGATGTCAAGTATGAGATTGAAAGGGAAGGTGGTTTAAATGTAATTGAGCGTTCAATTGAAGGGGATAATGTTGTTTTCAAATTAAATGAATATTGTAAGCCTCGTAGTGAACGCTTTGTTGTTTATGATAAAGTGAATTCTAAATTTGTTTGTGATTTTCGGATGTTTGAATCTTGTGGCATTCCATGTCGACATATTTTTTGTGCTATGAGACTGAAGCACATAGATGCTATACCCCCATGTATGATTTGCAACCGATGGAGGAAGGATGTTAAGAGTGACTTCATGATATCAGATGGTTTGGATGAGGTAGAACCTGACATGATGAGGGTTTGCCGTTTTGTGGTTGCTAGCTCTCATTGTAACAGTCTTTGTGACATGGTTTCCCAAAAGTGTGAGCATTTTAAGGAGTTTATAAATGACATTATGAAGCTGAAACAGAAGTATGAGAGATTGTCTTCCAGTAGTAGCACAACTAATGTTGAGGAAAATGTTGTACAAGATCCCACAGTTGTGAAGACGAAAGGTGCTCCTATGAAGACAAGGAAGAGGCGTAAGAGTAAGAGGTGTTCAAACTGTAACATTTCTGGACATGTTATCACAACCTGTCCTAGGTTGTTTCCACCAGAAGTTGATGAAGTCAACATTAATGAAGAAGACCATGGTCCTGAGTCACAAACTGTTAGGAGGGATGCAGTCCAAGTAATTTCCTAG 2337 0.3714 MDFNSDDSAVNLDDDRDVSYSDSSSSHEMTSGNDIHSDEGNESIHPEADMDEENYVLDTDVRDGVSRRIIDLTNDDIRALEFASEEHAYNFYFSYAKCKGFAMRKDDVIRDKKGMVIMRQYLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDQKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDVVAGLSYLQGKADSNPVFFSRFLCSEDGKVTHLFWCDANSRADFQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHSQTVIFGCALIADETIDTYKWVLRMFLEAMFNKHPAAVVTDGDGSMREVIKAVFPNASHRLCGWHLNKNACENVKNPKFLDDFKKAMYSNFTPNQFEEFWEEMVTKHGLQGNRWVKKTYDIKEMWASAYLRDKFFARIRTTSQCEGINSLIKAYVRSKNTIIEFIRNFEHALREYRYKELCSDFNSIYFEPVLTTSLQKIERQTSKVFTLDIFKDVKYEIEREGGLNVIERSIEGDNVVFKLNEYCKPRSERFVVYDKVNSKFVCDFRMFESCGIPCRHIFCAMRLKHIDAIPPCMICNRWRKDVKSDFMISDGLDEVEPDMMRVCRFVVASSHCNSLCDMVSQKCEHFKEFINDIMKLKQKYERLSSSSSTTNVEENVVQDPTVVKTKGAPMKTRKRRKSKRCSNCNISGHVITTCPRLFPPEVDEVNINEEDHGPESQTVRRDAVQVIS. 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04869 778 MobiDBLite consensus disorder prediction 1 53 - -
Seca11g04869 778 Pfam MULE transposase domain 302 396 IPR018289 -
Seca11g04869 778 Pfam FAR1 DNA-binding domain 90 180 IPR004330 -
Seca11g04869 778 PANTHER OS01G0519700 PROTEIN 80 729 - -
Seca11g04869 778 MobiDBLite consensus disorder prediction 32 53 - -
Seca11g04869 778 MobiDBLite consensus disorder prediction 758 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04869 Seca-Chr11 138814788 138817124 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g04869 MULE 1.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04869 - - ccaj:109792835 828.55