Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04861 ATGCGCTTATTGGCACACATTGACTTCTTTGCAATTGTCAAAATTGATGATGGCAAAGAGGCTTATGCTCTTACCCCTCCATCACAGCTCCTTGTCAACGGCACTGATCACTGCCTCTCCTCAATGGTTCATTTCTTAAATAGCCCAACTCTTGTTGGTTTATACCATCAATTGGGGAAATGGACTTCTGGGGAGGACCTCACAATTGTTGAGACCGCATTAGGCTCTGGAAGCTATTGGGATTTTGTTCATCAAAATCCCACTCATTTGAAGACTTTCAATGAGGCTATGGAAAGTGATTCTCATGTGGTAAGGTTGGCATTGAGAGATTGCAAATCAGTTTTTGAAGGCCTCAATTCCTTAGTTGATGTTGGCGGTGGAACTGGAAACACGGCTAAGATTATCTGTGAGGCATTTCCGCAGTTAAAATACATTGTGTTGGATCTTCCTCAGGTTGTCACAGGCTTAACAGGAAACAACAACTTGAGTTTTGTTGGCGGTGACATGTTTAAATTTGTCCCTCAAGCTGATGCTGTTTTACTCAAGTGGGTGTTACACAATTGGAGTGATGACGATTGCATAAAGATTCTCAGAAATTGTAAAGACGCTATTTCAGGAAATGACAAAGGAGGAAAAGTGATCATAATAGACATTGTGATAAATGAAAAGAGAGATGAGCCTGAAATGACAGAAGTAAAACTTCAGCTTGATGTGGTTATGATGACCAGTCTCAATGGAAAAGAGAGGGATGAAAATGATTGGAAGCGACTTTTTGTGAAAGCAGGCTTCAAACATTACAGGATATTTCCCACATTTGGCTTTAGGTCTCTTATTGAGCTTTATCCTTAA 849 0.404 MRLLAHIDFFAIVKIDDGKEAYALTPPSQLLVNGTDHCLSSMVHFLNSPTLVGLYHQLGKWTSGEDLTIVETALGSGSYWDFVHQNPTHLKTFNEAMESDSHVVRLALRDCKSVFEGLNSLVDVGGGTGNTAKIICEAFPQLKYIVLDLPQVVTGLTGNNNLSFVGGDMFKFVPQADAVLLKWVLHNWSDDDCIKILRNCKDAISGNDKGGKVIIIDIVINEKRDEPEMTEVKLQLDVVMMTSLNGKERDENDWKRLFVKAGFKHYRIFPTFGFRSLIELYP. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04861 282 Gene3D Vaccinia Virus protein VP39 33 282 IPR029063 -
Seca11g04861 282 PANTHER O-METHYLTRANSFERASE 1 265 IPR016461 GO:0008168
Seca11g04861 282 FunFam O-methyltransferase ZRP4 33 282 - -
Seca11g04861 282 CDD AdoMet_MTases 121 220 - -
Seca11g04861 282 Pfam O-methyltransferase domain 58 264 IPR001077 GO:0008171
Seca11g04861 282 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 282 IPR016461 GO:0008168
Seca11g04861 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 38 280 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04861 Seca-Chr11 138633737 138637360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04861 78 280 Monolignol Biosynthesis Gene Families AT5G54160 37.073 2.56e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04861 K22588 - gmx:100818947 362.073