Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04857 ATGGAGTCGCGAGTCTTGTCACGCGCCACCACCTTCACTTCCCTCCCTCACCTCCGCAAAGTGCCGAGGGAATCCGTCGCCAATGCTTCTCTCGTCTCCGTGAAACCGATCGGGTCCGTCGCTGACGGTGGGAACCTAATCTGGGGAAGGCAGCTCCGTCCAGCGCTCTGCTCGCCGGCGTTGAAGAAGGAAGCTGTCCTCCTCCGTCCATGCCTCGCGGCCGCCTCCTCGCCGGCCGAGGGAAGCGATTCCGCCGGGGAAGCGAAGCCAGTCGGGTTCTTCGAAAAATACCCAGCTCTTGTGACCGGGTTTTTCTTCTTCATGTGGTACTTCTTGAATGTGATCTTTAACATCCTCAACAAGAAGATCTACAATTATTTCCCCTATCCTTACTTCGTGTCGGTTATCCATTTATTAGTGGGTGTGGTGTACTGTTTGGTGAGCTGGACCGTGGGCCTTCCTAAGCGGGCTCCTATAGACTCCAACCTGCTGAAGTTGCTCATTCCTGTGGCTGTGTGCCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCAGCAGTTGCTGTTTCTTTCACACATACCATCAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGCCAATCAATACCCATCACTTTATGGCTGTCACTTGCTCCTGTTGTTATTGGTGTGTCAATGGCCTCATTGACAGAGCTCTCATTCAACTGGGTCGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTTACATACCGGAGTATCTATTCAAAGAAAGCCATGGTTATATTCCATGCTACTCAGACTGATATGGATAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCACCGGCCGTAATTGTGGAAGGACCTGCACTATTGAAGCACGGCTTCAATGATGCAATTGCTAAAGTTGGTATGGTCAAGTTCGTCTCAGATCTCTTCTGGGTTGGGATGTTTTACCACCTCTACAACCAGGTGGCTACCAACACACTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGCAACGTACTGAAACGTGTATTTGTGATTGGATTTTCAATAATAGTCTTCGGTAACAAGATTTCCACCCAAACTGGTATAGGAACAGGCATTGCAATCGCTGGAGTGGCACTCTACTCCTTCATCAAAGCCAAGATGGAGGAAGAGAAGCGACAAGCGAAAGCAGCATAA 1236 0.4903 MESRVLSRATTFTSLPHLRKVPRESVANASLVSVKPIGSVADGGNLIWGRQLRPALCSPALKKEAVLLRPCLAAASSPAEGSDSAGEAKPVGFFEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMVIFHATQTDMDSTNVYAYISIIALIVCIPPAVIVEGPALLKHGFNDAIAKVGMVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTGIAIAGVALYSFIKAKMEEEKRQAKAA. 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04857 411 PANTHER SOLUTE CARRIER FAMILY 35 103 402 - -
Seca11g04857 411 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 405 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca11g04857 411 Pfam Triose-phosphate Transporter family 101 395 IPR004853 -
Seca11g04857 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 327 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04857 Seca-Chr11 138457044 138462395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04857 1 409 Antiporters AT5G46110 78.520 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04857 K15283 - gmx:732611 731.48