Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04827 ATGGAAAGTGATTCTCATGTGGTGAGGTTGGCACTGAGAGATTGCAATTCAGTTTTTGAGGGATTGGGTTCTCTCTTTGATGTTGGAGGTGGAACTGGAAACACAACTAAAATTATTTGTGAGGCATTTCCTATGTTAAAGTGCACAGTATTGGACCTTCCACAAGTAGTTAATGGTTTAAGTGCACAGTATTTGGCGGCAACATGTTTAAATCTATCCTTCAAGCTGATGCAGTTTTACTCAAGTGACTCTGATGTGGTGAGGCTGGCACTTAGAGATTGCAAATCAGTTTTTGAGGGATTGGGTTCTTTGGTTGATGTTGGAGGTGGAACTGGAAACACAACTACAATTATTTGTGAGGCATATCCTATGTTAAAGTGCACGGTGTTGGACCTTCCACAAGTTGTTAATGGTTTAAAAGGAAGCAACAATTTGAGTTATGTTGGCGGCAACATGTTTAAATCTATCCCTCAAGCTAATGCAGTTTTACTAAAGTGGATTTTACATGATTGGAATGAGGATGACTGTGTAAAGATCCTTAAAAATTATAGAGAAGTTGTTTCAAGAAATGAAAAAGTGATCATAATAAATATTGTAATAAATAAAATGCAAGATGAGCATGAAATGACATAA 633 0.3681 MESDSHVVRLALRDCNSVFEGLGSLFDVGGGTGNTTKIICEAFPMLKCTVLDLPQVVNGLSAQYLAATCLNLSFKLMQFYSSDSDVVRLALRDCKSVFEGLGSLVDVGGGTGNTTTIICEAYPMLKCTVLDLPQVVNGLKGSNNLSYVGGNMFKSIPQANAVLLKWILHDWNEDDCVKILKNYREVVSRNEKVIIINIVINKMQDEHEMT. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04827 210 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 206 IPR029063 -
Seca11g04827 210 Gene3D Vaccinia Virus protein VP39 1 74 IPR029063 -
Seca11g04827 210 Gene3D Vaccinia Virus protein VP39 75 210 IPR029063 -
Seca11g04827 210 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 210 IPR016461 GO:0008168
Seca11g04827 210 PANTHER O-METHYLTRANSFERASE 1 57 IPR016461 GO:0008168
Seca11g04827 210 Pfam O-methyltransferase domain 7 61 IPR001077 GO:0008171
Seca11g04827 210 Pfam O-methyltransferase domain 82 206 IPR001077 GO:0008171
Seca11g04827 210 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 58 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04827 Seca-Chr11 137416477 137421499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04827 1 58 Monolignol Biosynthesis Gene Families AT5G54160 41.379 1.75e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04827 K22588 - gmx:100813225 155.992