Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04820 ATGTGGGCCACCTTCATGGGCCTCTTGATTCAACTGCTGTTTGCCAGGGTTAGTGTCGCTACAAGTCACCACCTCGCTGAGCTATGTAGGGATGAGTATCCCAATCGGGCTCACCTTGTGCTTTGGTTCATGGCCGAGCTCGCTTTGATTGGTGCTGATATTCAAGAGGTCATTGGTAGTGCCATCACCATGAAGGGAATCAAGCATGTGGTCAGGGTGCAGCGAAAATAA 231 0.5065 MWATFMGLLIQLLFARVSVATSHHLAELCRDEYPNRAHLVLWFMAELALIGADIQEVIGSAITMKGIKHVVRVQRK. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04820 76 Pfam Natural resistance-associated macrophage protein 1 67 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca11g04820 76 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 65 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04820 Seca-Chr11 137209461 137209691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04820 1 65 Inorganic Solute Cotransporters AT2G23150 76.923 2.35e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04820 K21398 - gmx:100791117 112.079