Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04819 ATGAAGAAGGTTTCCAAGACCAGCTGCAAGTCTGCATCACACAGGCTCTTTAAGGATAAGGCTAAGAATCGTGTTGATGACCTGCAGCTGATGTTCCTGGATCTGCAGTTTGCCAGGAAGGAGAGCCGTACAGTTGATGCTGCAGTGCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCCTCTCCTGCTTCTTCTTTGCAGCAAGGTGGCAGCCTTGGGTCATTCTCCACCGATATCTGTCGGCTTCTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAACTGCACCTAAGCCTGAACCTAACGATCAGACTCTGCAGGTGCAGGCTAGGGGTAAGGTCATATTCCAAGAGTACAGATCTGGGAGTAGTAGTGAACCAAACATCCGCTATGGTGATGAACCAAGGTGTGGTGGTTGGGTGTGGCCAAATTCTTACGCAACAAACCAGCAATCAGGGTGTGGTGGGTGGCGCATGGCTAATCCAGTATCCAGCAATGGAAAGCAGAAACTGCGCTTTCCTTGCAATGCTCTGATAATTAGACTGGCCACAACAGTGAGTGGTACAAGTAGAGTTTGCTGGTTTGGCATGATTGAATCAGGGTTGAGGCCAACCCCATCTAGTGGAGAAAGGCTTTTTTTGTTGTTGTTATGTATTTTCAATGCTGGTCTAGTTTCAATATTGGATCTCACCTGTAAATGTAACAAGTTTCCTGGTTTAACTGTAAATCAGGGCCAACAGCAACATGATTTCCCATTGGTTGATGAGTGCAAACACTCTCCCCCAGGAGTTCAAAATGTGTCAGCCAGCAACCCAGATGTGTCTGCTTTAGAATATCATCAGTTTGATTTGCAGCAGGACTTCGATCACAGCTTTTATACTGGTTTTAATGGTACAGGTTATGGTGAGGAGGATGCTATTCCTCATATATCTAGCTATCTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAGTGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTGAATGAAGGGCCTCCAGGCATGGCCCCAGTTCTTCGACCTGGTGGCATTGGTTTGAAGGACAATTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTCGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAATCTAGAAAGCAAGTGATAAATGAATTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTAAACCATTTTGAGTGGCACCTTTATGAATATGAGATTAGCAAGTGTGATGCATGTGCCTTATACCGATTGGAACTAAAGCTTGTTGATGGGAAGAAGAACTCCAAGGCAAAGGTTACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAAGCTCTCTGCTGAGTTTCCTGATAACAAAAGACCTGCCAAAGGCAGAGCCAAAATTAATGCCAAAGTTGGCATAGGTGGAGTCTATTCAGCTTCACACAGAGTGACTCCACTAAATGGAACATATGAGTATGGGTTAGCTTCACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1815 0.4573 MKKVSKTSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLTAPKPEPNDQTLQVQARGKVIFQEYRSGSSSEPNIRYGDEPRCGGWVWPNSYATNQQSGCGGWRMANPVSSNGKQKLRFPCNALIIRLATTVSGTSRVCWFGMIESGLRPTPSSGERLFLLLLCIFNAGLVSILDLTCKCNKFPGLTVNQGQQQHDFPLVDECKHSPPGVQNVSASNPDVSALEYHQFDLQQDFDHSFYTGFNGTGYGEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKVTNDSVADLQKQMGKLSAEFPDNKRPAKGRAKINAKVGIGGVYSASHRVTPLNGTYEYGLASPYDYLVENMGDYYGT. 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04819 604 PANTHER TRANSCRIPTION FACTOR VOZ1 1 599 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04819 Seca-Chr11 137176510 137182202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04819 249 602 VOZ-9 Transcription Factor Family AT1G28520 68.937 1.48e-177 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Seca11g04819 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04819 - - gmx:100798565 693.73